Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NIPAL3Q6P499 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.13□□□□□ -1.91
NIPAL3Q6P499 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NIPAL3Q6P499 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
NIPAL3Q6P499 AC097714.1-201ENST00000511272 1647 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 SNORA73.2-201ENST00000364946 201 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MIR218-2-201ENST00000385006 110 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 RPS29P4-201ENST00000414733 161 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC017079.2-201ENST00000416102 485 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 SYF2P2-201ENST00000417620 583 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 EZH2P1-201ENST00000431167 291 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 SNRPEP4-201ENST00000435815 279 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AL645638.1-201ENST00000440519 361 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MTND2P20-201ENST00000440805 661 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MTCO1P53-201ENST00000441633 699 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 HSPE1P28-201ENST00000443139 211 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 SNORA84-201ENST00000459229 133 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AP001992.1-205ENST00000462248 379 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 RPL23AP67-201ENST00000465341 474 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 CBX3P3-201ENST00000508108 532 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 ERHP1-201ENST00000523006 310 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 HSPA8P13-201ENST00000523715 472 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC022690.1-201ENST00000526681 550 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC004024.1-201ENST00000549244 247 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 BNIP3P11-201ENST00000603878 563 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC069304.2-201ENST00000605154 435 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC012443.1-201ENST00000605605 231 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC025588.4-201ENST00000615802 908 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC022509.4-201ENST00000621404 572 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 CRYM-AS1-204ENST00000637983 556 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MTND4P9-201ENST00000507819 1346 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
NIPAL3Q6P499 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
NIPAL3Q6P499 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 RNU6-882P-201ENST00000391025 103 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AL136372.1-201ENST00000403060 228 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AL590084.1-201ENST00000407885 387 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 RNA5SP107-201ENST00000411358 122 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC093578.1-201ENST00000415219 368 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 CYCSP4-201ENST00000429682 331 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 RAC1P7-201ENST00000445367 377 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 ARPC3P2-201ENST00000457786 533 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 RPL23AP44-201ENST00000482216 473 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 RPL21P131-201ENST00000497298 483 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC022861.1-201ENST00000522981 663 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 OR5AK1P-201ENST00000524837 922 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC103843.2-201ENST00000530523 682 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC005832.3-201ENST00000537929 631 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AP005205.1-201ENST00000563503 508 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AL132657.2-201ENST00000564417 358 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 RN7SL339P-201ENST00000580597 296 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC006254.3-201ENST00000603353 884 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC069431.2-201ENST00000604149 1099 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC097504.2-201ENST00000608088 454 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AL138478.1-201ENST00000612252 832 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC006133.1-201ENST00000617106 264 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC002076.2-201ENST00000617362 122 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC243312.2-201ENST00000623340 601 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NIPAL3Q6P499 AC010733.2-201ENST00000589496 5702 ntBASIC3.11□□□□□ -1.91
NIPAL3Q6P499 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms