Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC44A4Q53GD3 AC073544.1-201ENST00000600110 1595 ntBASIC4.53□□□□□ -1.69
SLC44A4Q53GD3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.69
SLC44A4Q53GD3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 ZNF734P-201ENST00000419494 1534 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC097504.1-201ENST00000515103 2415 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AP002001.2-201ENST00000529025 1469 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.390-201ENST00000383932 102 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 RNU6-259P-201ENST00000383999 107 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 RPL21P32-201ENST00000419877 477 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 RPL7P2-201ENST00000427639 268 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 NANOGP6-201ENST00000429190 847 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 PDSS1P2-201ENST00000449397 678 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 Z82190.1-201ENST00000454534 490 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC108064.1-201ENST00000513791 460 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 MIR4528-201ENST00000577763 90 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 SLC25A36P1-201ENST00000590111 465 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AL589743.7-201ENST00000612637 233 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC097714.1-201ENST00000511272 1647 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AL049780.3-201ENST00000624612 1583 ntBASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A4Q53GD3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 CCT4P2-201ENST00000233836 1548 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 EOGT-210ENST00000615922 1931 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 OR4G2P-201ENST00000328113 903 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RNU6-339P-201ENST00000384310 107 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 U3.29-201ENST00000391296 212 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 BTF3P7-201ENST00000407097 488 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AL603766.1-201ENST00000407763 664 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RN7SKP56-201ENST00000410513 331 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RNU2-15P-201ENST00000410692 191 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RNA5SP39-201ENST00000411245 120 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 MTND1P2-201ENST00000430604 821 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 SDCBPP1-201ENST00000440192 890 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RPL21P89-201ENST00000444021 467 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AL358232.1-201ENST00000448030 501 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AL162151.2-201ENST00000448875 158 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 HMGB1P15-201ENST00000453854 435 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AC079804.1-201ENST00000461922 436 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AP001992.1-205ENST00000462248 379 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RPS27AP13-201ENST00000498403 237 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RNA5SP49-201ENST00000516450 115 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RNA5SP143-201ENST00000516936 115 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 PAICSP4-201ENST00000517543 1253 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms