Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC093716.1-201ENST00000435923 377 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 COX6CP2-201ENST00000444980 225 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 CALM1P2-201ENST00000452941 448 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AC092754.2-201ENST00000463506 460 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
ABCA4P78363 AC106872.3-201ENST00000495104 446 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA4P78363 AP004242.1-201ENST00000533701 349 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA4P78363 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA4P78363 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.02□□□□□ -2.09
ABCA4P78363 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ABCA4P78363 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ABCA4P78363 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
ABCA4P78363 RNA5SP88-201ENST00000365560 109 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ABCA4P78363 HNRNPDP2-201ENST00000406475 478 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 NDUFB4P5-201ENST00000415445 361 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AL606490.7-201ENST00000433136 191 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA4P78363 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA4P78363 AL133271.1-201ENST00000538229 291 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.02□□□□□ -2.09
ABCA4P78363 AC123904.3-201ENST00000547218 814 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA4P78363 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.02□□□□□ -2.09
ABCA4P78363 AL589935.2-201ENST00000616471 1231 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 AC048347.1-201ENST00000624621 427 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 LRRC77P-213ENST00000637727 880 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ABCA4P78363 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ABCA4P78363 MAPK10-266ENST00000641066 6555 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 GTF2H2B-203ENST00000508065 1432 ntBASIC2.02□□□□□ -2.09
ABCA4P78363 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ABCA4P78363 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.01□□□□□ -2.09
ABCA4P78363 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ABCA4P78363 AL024474.1-201ENST00000404655 591 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCA4P78363 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.01□□□□□ -2.09
ABCA4P78363 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCA4P78363 LARP7P4-201ENST00000481075 878 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.01□□□□□ -2.09
ABCA4P78363 RNA5SP76-201ENST00000516277 87 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 MIR3186-201ENST00000577404 85 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ABCA4P78363 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCA4P78363 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCA4P78363 MIR6733-201ENST00000635723 61 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ABCA4P78363 AC007390.1-201ENST00000415722 356 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 MORF4L1P6-201ENST00000418771 268 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC244505.4-201ENST00000434905 287 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 SSXP5-201ENST00000443473 287 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCA4P78363 RPL23AP11-201ENST00000475260 469 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 RN7SL283P-201ENST00000489055 303 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC104090.1-201ENST00000506341 1171 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC034244.2-201ENST00000514668 858 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.01□□□□□ -2.09
ABCA4P78363 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCA4P78363 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ABCA4P78363 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.01□□□□□ -2.09
ABCA4P78363 AL389895.1-201ENST00000554127 252 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AP001180.3-201ENST00000582221 145 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC099778.2-201ENST00000610904 211 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC107871.2-201ENST00000612894 502 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AC005156.1-201ENST00000613371 573 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.01□□□□□ -2.09
ABCA4P78363 SEPT7P7-201ENST00000420492 1301 ntBASIC2.01□□□□□ -2.09
ABCA4P78363 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ABCA4P78363 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2□□□□□ -2.09
ABCA4P78363 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ABCA4P78363 UQCRFS1P3-201ENST00000407697 385 ntBASIC2□□□□□ -2.09
ABCA4P78363 RN7SKP140-201ENST00000411196 284 ntBASIC2□□□□□ -2.09
ABCA4P78363 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2□□□□□ -2.09
ABCA4P78363 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2□□□□□ -2.09
ABCA4P78363 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2□□□□□ -2.09
ABCA4P78363 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2□□□□□ -2.09
ABCA4P78363 AC146507.1-201ENST00000468335 354 ntBASIC2□□□□□ -2.09
ABCA4P78363 DCAF13P1-201ENST00000495256 1330 ntBASIC2□□□□□ -2.09
ABCA4P78363 MTND4LP22-201ENST00000508209 276 ntBASIC2□□□□□ -2.09
ABCA4P78363 RNU6-319P-201ENST00000516025 108 ntBASIC2□□□□□ -2.09
ABCA4P78363 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2□□□□□ -2.09
ABCA4P78363 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2□□□□□ -2.09
ABCA4P78363 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2□□□□□ -2.09
ABCA4P78363 AC022884.3-201ENST00000579571 248 ntBASIC2□□□□□ -2.09
ABCA4P78363 AC092628.2-201ENST00000622492 339 ntBASIC2□□□□□ -2.09
ABCA4P78363 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2□□□□□ -2.09
ABCA4P78363 API5P2-201ENST00000397055 1498 ntBASIC2□□□□□ -2.09
ABCA4P78363 SNORA26.9-201ENST00000391322 122 ntBASIC2□□□□□ -2.09
ABCA4P78363 OR7L1P-201ENST00000456181 380 ntBASIC2□□□□□ -2.09
ABCA4P78363 RPL37P6-202ENST00000464216 403 ntBASIC2□□□□□ -2.09
ABCA4P78363 AC068587.2-201ENST00000478386 781 ntBASIC2□□□□□ -2.09
ABCA4P78363 GAPDHP39-201ENST00000481866 979 ntBASIC2□□□□□ -2.09
ABCA4P78363 RPL36AP51-201ENST00000487216 318 ntBASIC2□□□□□ -2.09
ABCA4P78363 RPL23AP49-201ENST00000492925 468 ntBASIC2□□□□□ -2.09
ABCA4P78363 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2□□□□□ -2.09
ABCA4P78363 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms