Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 BX510359.2-201ENST00000417920 305 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.86□□□□□ -1.79
SOX2P48431 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.86□□□□□ -1.79
SOX2P48431 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.86□□□□□ -1.79
SOX2P48431 AC005517.2-201ENST00000424673 553 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC006548.1-201ENST00000427470 102 ntBASIC3.86□□□□□ -1.79
SOX2P48431 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.86□□□□□ -1.79
SOX2P48431 RPS6P12-201ENST00000432491 726 ntBASIC3.86□□□□□ -1.79
SOX2P48431 ELOCP18-201ENST00000434209 337 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AL512326.1-201ENST00000443050 721 ntBASIC3.86□□□□□ -1.79
SOX2P48431 RPS4XP4-201ENST00000443195 763 ntBASIC3.86□□□□□ -1.79
SOX2P48431 RPL29P29-201ENST00000448725 423 ntBASIC3.86□□□□□ -1.79
SOX2P48431 MTND1P9-201ENST00000453775 944 ntBASIC3.86□□□□□ -1.79
SOX2P48431 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.86□□□□□ -1.79
SOX2P48431 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 snoU109.4-201ENST00000458953 143 ntBASIC3.86□□□□□ -1.79
SOX2P48431 RPL38P1-201ENST00000460914 211 ntBASIC3.86□□□□□ -1.79
SOX2P48431 S100A11P1-201ENST00000477525 312 ntBASIC3.86□□□□□ -1.79
SOX2P48431 RPL35P6-201ENST00000490024 372 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC023194.1-201ENST00000493084 308 ntBASIC3.86□□□□□ -1.79
SOX2P48431 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.86□□□□□ -1.79
SOX2P48431 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.86□□□□□ -1.79
SOX2P48431 AC006499.6-201ENST00000511169 607 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.86□□□□□ -1.79
SOX2P48431 OR5AQ1P-201ENST00000527596 927 ntBASIC3.86□□□□□ -1.79
SOX2P48431 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 SETP7-201ENST00000552169 453 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 HMGB1P33-201ENST00000563485 527 ntBASIC3.86□□□□□ -1.79
SOX2P48431 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.86□□□□□ -1.79
SOX2P48431 RPL23AP97-201ENST00000568955 471 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.86□□□□□ -1.79
SOX2P48431 AL669831.4-202ENST00000590817 238 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC011451.2-201ENST00000604303 598 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.86□□□□□ -1.79
SOX2P48431 AL355073.2-201ENST00000612106 557 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC087385.3-201ENST00000620477 187 ntBASIC3.86□□□□□ -1.79
SOX2P48431 AC002550.2-201ENST00000621246 394 ntBASIC3.86□□□□□ -1.79
SOX2P48431 CR381572.1-201ENST00000625098 102 ntBASIC3.86□□□□□ -1.79
SOX2P48431 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.86□□□□□ -1.79
SOX2P48431 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SOX2P48431 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 AC010928.1-201ENST00000592477 1447 ntBASIC3.86□□□□□ -1.79
SOX2P48431 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 AC027287.1-201ENST00000553115 1453 ntBASIC3.86□□□□□ -1.79
SOX2P48431 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX2P48431 AC006971.1-201ENST00000407916 4486 ntBASIC3.85□□□□□ -1.79
SOX2P48431 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SOX2P48431 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX2P48431 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX2P48431 AL139811.1-201ENST00000424779 2299 ntBASIC3.85□□□□□ -1.79
SOX2P48431 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX2P48431 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 RNU6-989P-201ENST00000362756 107 ntBASIC3.85□□□□□ -1.79
SOX2P48431 RNY1P12-201ENST00000364251 105 ntBASIC3.85□□□□□ -1.79
SOX2P48431 RNY4P16-201ENST00000364768 94 ntBASIC3.85□□□□□ -1.79
SOX2P48431 RNU6-282P-201ENST00000365357 103 ntBASIC3.85□□□□□ -1.79
SOX2P48431 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX2P48431 SNORA20.2-201ENST00000383922 131 ntBASIC3.85□□□□□ -1.79
SOX2P48431 Y_RNA.402-201ENST00000383972 102 ntBASIC3.85□□□□□ -1.79
SOX2P48431 MIR153-1-201ENST00000384914 90 ntBASIC3.85□□□□□ -1.79
SOX2P48431 SNORA74C-2-201ENST00000411179 201 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX2P48431 SNRPFP1-201ENST00000414761 252 ntBASIC3.85□□□□□ -1.79
SOX2P48431 RPS15AP12-201ENST00000419498 388 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX2P48431 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX2P48431 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX2P48431 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 CEACAMP7-201ENST00000444105 496 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX2P48431 AL590399.6-201ENST00000446396 307 ntBASIC3.85□□□□□ -1.79
SOX2P48431 RPL23AP43-201ENST00000446445 471 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 WASF1P1-201ENST00000447560 1131 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX2P48431 MTND2P24-201ENST00000453434 806 ntBASIC3.85□□□□□ -1.79
SOX2P48431 AC010469.1-201ENST00000463864 576 ntBASIC3.85□□□□□ -1.79
SOX2P48431 MTCO2P29-201ENST00000465212 189 ntBASIC3.85□□□□□ -1.79
SOX2P48431 ARL4AP2-201ENST00000507378 601 ntBASIC3.85□□□□□ -1.79
SOX2P48431 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX2P48431 AC105914.1-201ENST00000511798 226 ntBASIC3.85□□□□□ -1.79
SOX2P48431 PHBP17-201ENST00000528576 541 ntBASIC3.85□□□□□ -1.79
SOX2P48431 BRD9P1-201ENST00000529855 560 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms