Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-878P-201ENST00000384578 110 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 RNU1-89P-201ENST00000384592 164 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 RNA5SP56-201ENST00000410277 118 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AL049610.1-201ENST00000423374 372 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 PSMA6P3-201ENST00000428242 164 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 SKP1P1-201ENST00000438081 489 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AL008629.1-201ENST00000438615 184 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA13P31271 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXA13P31271 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA13P31271 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 MTND2P19-201ENST00000449129 1012 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AC005297.2-201ENST00000450430 606 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AL109741.2-201ENST00000455561 343 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXA13P31271 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 AC097493.1-201ENST00000463958 372 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 RN7SL594P-201ENST00000470590 287 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 SYPL1P1-201ENST00000473622 768 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA13P31271 AC104685.1-201ENST00000502445 371 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 VWA8P1-201ENST00000510889 176 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXA13P31271 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 AC022861.1-201ENST00000522981 663 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA13P31271 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA13P31271 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA13P31271 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 OSBPL9P5-201ENST00000542581 171 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AC091515.1-201ENST00000548110 679 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 NCAPGP2-201ENST00000557911 754 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AL360157.1-201ENST00000565962 87 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA13P31271 AC067852.3-201ENST00000589177 561 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA13P31271 AL136981.2-201ENST00000617319 734 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXA13P31271 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA13P31271 AC012020.1-201ENST00000624541 1728 ntBASIC3.97□□□□□ -1.77
HOXA13P31271 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA13P31271 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA13P31271 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA13P31271 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HOXA13P31271 RNU6-989P-201ENST00000362756 107 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 SNORD113-6-201ENST00000363345 75 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 RNU6-837P-201ENST00000391056 108 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 PTMAP5-201ENST00000393073 333 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXA13P31271 LAP3P1-201ENST00000403648 294 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 AL391417.1-201ENST00000404100 426 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 SNORA11.1-201ENST00000408133 129 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXA13P31271 AC017083.1-201ENST00000428093 483 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 MTND5P25-201ENST00000430499 799 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 MRPS18BP2-201ENST00000434310 759 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 Z83846.1-201ENST00000446798 265 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA13P31271 ART2BP-201ENST00000453501 499 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 USP9YP34-201ENST00000453983 808 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 HMGB3P30-201ENST00000457863 606 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 AC117522.2-201ENST00000510049 657 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA13P31271 AC105185.1-201ENST00000518705 535 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA13P31271 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXA13P31271 DEFB131D-201ENST00000526803 184 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXA13P31271 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA13P31271 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
HOXA13P31271 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXA13P31271 HSPE1P3-201ENST00000559254 309 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA13P31271 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA13P31271 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA13P31271 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA13P31271 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXA13P31271 AL358072.1-201ENST00000604156 575 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 CR381670.1-201ENST00000624291 1693 ntBASIC3.96□□□□□ -1.78
HOXA13P31271 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA13P31271 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA13P31271 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA13P31271 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA13P31271 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HOXA13P31271 MAPK10-373ENST00000641983 6772 ntBASIC3.95□□□□□ -1.78
HOXA13P31271 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA13P31271 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA13P31271 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXA13P31271 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXA13P31271 RNA5SP267-201ENST00000364893 126 ntBASIC3.95□□□□□ -1.78
HOXA13P31271 AC119751.3-201ENST00000399720 670 ntBASIC3.95□□□□□ -1.78
HOXA13P31271 AL031679.1-201ENST00000400616 525 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms