Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.11□□□□□ -1.75
HOXA11P31270 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXA11P31270 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
HOXA11P31270 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXA11P31270 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXA11P31270 AC012435.1-202ENST00000568772 240 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA11P31270 AC025946.2-201ENST00000603398 234 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 AC007566.2-201ENST00000603642 413 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 AC069304.2-201ENST00000605154 435 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 AC068276.1-201ENST00000605793 379 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 U6atac.1-201ENST00000616025 117 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 AC009093.8-201ENST00000641769 292 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA11P31270 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA11P31270 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA11P31270 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA11P31270 AC097504.1-201ENST00000515103 2415 ntBASIC4.11□□□□□ -1.75
HOXA11P31270 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA11P31270 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
HOXA11P31270 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA11P31270 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 Y_RNA.359-201ENST00000365498 102 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 LAP3P1-201ENST00000403648 294 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AL139098.1-201ENST00000407291 389 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 RNU2-66P-201ENST00000410650 161 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA11P31270 MTCYBP38-201ENST00000417160 1123 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXA11P31270 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 AC010975.2-201ENST00000427781 588 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA11P31270 AL512649.1-201ENST00000428997 581 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AL513175.1-201ENST00000431492 780 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 ELOCP18-201ENST00000434209 337 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 UBE2FP3-201ENST00000436366 524 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA11P31270 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXA11P31270 AC092451.1-201ENST00000480211 153 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AC078918.1-201ENST00000498515 228 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA11P31270 RNA5SP208-201ENST00000516156 78 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXA11P31270 AP001207.1-201ENST00000524051 481 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA11P31270 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA11P31270 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA11P31270 MIR4504-201ENST00000577413 92 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AC024220.1-201ENST00000603675 484 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AL009028.1-201ENST00000604895 802 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 AL354760.1-201ENST00000608357 643 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 AC009237.17-201ENST00000618111 748 ntBASIC4.1□□□□□ -1.75
HOXA11P31270 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HOXA11P31270 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXA11P31270 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA11P31270 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA11P31270 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA11P31270 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA11P31270 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA11P31270 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA11P31270 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA11P31270 AC107081.3-201ENST00000612715 2034 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 IPO8P1-201ENST00000455509 3109 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA11P31270 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA11P31270 AC016716.1-201ENST00000265882 708 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 FGF7P2-201ENST00000332473 296 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HOXA11P31270 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA11P31270 RNA5SP44-201ENST00000410446 133 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 RNU6-272P-201ENST00000411028 104 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA11P31270 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA11P31270 CYP4F29P-201ENST00000420685 446 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA11P31270 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA11P31270 LARP1BP3-201ENST00000437229 869 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 AL512286.1-201ENST00000439244 400 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 MTND2P20-201ENST00000440805 661 ntBASIC4.09□□□□□ -1.75
HOXA11P31270 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms