Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
COL4A5P29400 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
COL4A5P29400 FRG1BP-201ENST00000278882 761 ntBASIC2.58□□□□□ -2
COL4A5P29400 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COL4A5P29400 IPMKP1-201ENST00000425988 855 ntBASIC2.58□□□□□ -2
COL4A5P29400 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.58□□□□□ -2
COL4A5P29400 RPL7P54-201ENST00000438336 674 ntBASIC2.58□□□□□ -2
COL4A5P29400 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.58□□□□□ -2
COL4A5P29400 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.58□□□□□ -2
COL4A5P29400 AC069277.2-201ENST00000454211 432 ntBASIC2.58□□□□□ -2
COL4A5P29400 EIF2S2P4-201ENST00000461070 984 ntBASIC2.58□□□□□ -2
COL4A5P29400 RN7SL283P-201ENST00000489055 303 ntBASIC2.58□□□□□ -2
COL4A5P29400 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.58□□□□□ -2
COL4A5P29400 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.58□□□□□ -2
COL4A5P29400 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.58□□□□□ -2
COL4A5P29400 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.58□□□□□ -2
COL4A5P29400 AC002076.2-201ENST00000617362 122 ntBASIC2.58□□□□□ -2
COL4A5P29400 CU459211.1-201ENST00000635667 749 ntBASIC2.58□□□□□ -2
COL4A5P29400 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
COL4A5P29400 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COL4A5P29400 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
COL4A5P29400 ZNF542P-204ENST00000482727 1305 ntBASIC2.58□□□□□ -2
COL4A5P29400 AL592437.2-201ENST00000421655 2434 ntBASIC2.57□□□□□ -2
COL4A5P29400 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.57□□□□□ -2
COL4A5P29400 GSTA12P-201ENST00000402398 508 ntBASIC2.57□□□□□ -2
COL4A5P29400 Z82205.1-201ENST00000428456 297 ntBASIC2.57□□□□□ -2
COL4A5P29400 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.57□□□□□ -2
COL4A5P29400 NDUFA5P4-201ENST00000436704 385 ntBASIC2.57□□□□□ -2
COL4A5P29400 CASP3P1-201ENST00000446037 609 ntBASIC2.57□□□□□ -2
COL4A5P29400 AL118520.1-201ENST00000450770 291 ntBASIC2.57□□□□□ -2
COL4A5P29400 VTA1P2-201ENST00000520205 911 ntBASIC2.57□□□□□ -2
COL4A5P29400 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
COL4A5P29400 AC068446.3-201ENST00000555285 382 ntBASIC2.57□□□□□ -2
COL4A5P29400 AC084373.1-201ENST00000603311 235 ntBASIC2.57□□□□□ -2
COL4A5P29400 AL139286.1-201ENST00000604465 483 ntBASIC2.57□□□□□ -2
COL4A5P29400 snoU13.31-201ENST00000607291 104 ntBASIC2.57□□□□□ -2
COL4A5P29400 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.57□□□□□ -2
COL4A5P29400 AC069234.5-201ENST00000611056 416 ntBASIC2.57□□□□□ -2
COL4A5P29400 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.57□□□□□ -2
COL4A5P29400 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.57□□□□□ -2
COL4A5P29400 AC009452.1-201ENST00000640823 606 ntBASIC2.57□□□□□ -2
COL4A5P29400 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
COL4A5P29400 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL4A5P29400 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.57□□□□□ -2
COL4A5P29400 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
COL4A5P29400 AC114546.3-201ENST00000623582 1734 ntBASIC2.57□□□□□ -2
COL4A5P29400 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.57□□□□□ -2
COL4A5P29400 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.57□□□□□ -2
COL4A5P29400 Y_RNA.670-201ENST00000516255 105 ntBASIC2.57□□□□□ -2
COL4A5P29400 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.57□□□□□ -2
COL4A5P29400 GNAI2P1-201ENST00000541815 315 ntBASIC2.57□□□□□ -2
COL4A5P29400 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.57□□□□□ -2
COL4A5P29400 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.57□□□□□ -2
COL4A5P29400 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.57□□□□□ -2
COL4A5P29400 AC010200.2-201ENST00000605098 235 ntBASIC2.57□□□□□ -2
COL4A5P29400 AL450489.1-201ENST00000612071 468 ntBASIC2.57□□□□□ -2
COL4A5P29400 AC000123.2-201ENST00000623124 461 ntBASIC2.57□□□□□ -2
COL4A5P29400 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.57□□□□□ -2
COL4A5P29400 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL4A5P29400 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
COL4A5P29400 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
COL4A5P29400 RNU6-984P-201ENST00000363236 109 ntBASIC2.56□□□□□ -2
COL4A5P29400 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.56□□□□□ -2
COL4A5P29400 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.56□□□□□ -2
COL4A5P29400 RWDD4P2-201ENST00000426392 563 ntBASIC2.56□□□□□ -2
COL4A5P29400 AL390023.1-201ENST00000428836 262 ntBASIC2.56□□□□□ -2
COL4A5P29400 TRIM60P18-201ENST00000441518 828 ntBASIC2.56□□□□□ -2
COL4A5P29400 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.56□□□□□ -2
COL4A5P29400 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.56□□□□□ -2
COL4A5P29400 RWDD4P1-201ENST00000488019 565 ntBASIC2.56□□□□□ -2
COL4A5P29400 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL4A5P29400 USP9YP5-201ENST00000511770 630 ntBASIC2.56□□□□□ -2
COL4A5P29400 RNU6-319P-201ENST00000516025 108 ntBASIC2.56□□□□□ -2
COL4A5P29400 AC022790.1-201ENST00000522872 204 ntBASIC2.56□□□□□ -2
COL4A5P29400 AC090819.1-201ENST00000523800 1111 ntBASIC2.56□□□□□ -2
COL4A5P29400 AC034236.3-201ENST00000605999 461 ntBASIC2.56□□□□□ -2
COL4A5P29400 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.56□□□□□ -2
COL4A5P29400 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.56□□□□□ -2
COL4A5P29400 AC093010.3-201ENST00000570269 15214 ntBASIC2.56□□□□□ -2
COL4A5P29400 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
COL4A5P29400 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
COL4A5P29400 SNORA51.4-201ENST00000364993 124 ntBASIC2.55□□□□□ -2
COL4A5P29400 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL4A5P29400 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.55□□□□□ -2
COL4A5P29400 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL4A5P29400 AL034374.1-201ENST00000406329 351 ntBASIC2.55□□□□□ -2
COL4A5P29400 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.55□□□□□ -2
COL4A5P29400 AC003989.2-201ENST00000440224 169 ntBASIC2.55□□□□□ -2
COL4A5P29400 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
COL4A5P29400 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.55□□□□□ -2
COL4A5P29400 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
COL4A5P29400 AC011611.5-201ENST00000552477 578 ntBASIC2.55□□□□□ -2
COL4A5P29400 AGGF1P8-201ENST00000562979 1000 ntBASIC2.55□□□□□ -2
COL4A5P29400 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL4A5P29400 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL4A5P29400 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.55□□□□□ -2
COL4A5P29400 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.54□□□□□ -2
COL4A5P29400 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL4A5P29400 RN7SKP44-201ENST00000363602 316 ntBASIC2.54□□□□□ -2
COL4A5P29400 MIR499A-201ENST00000384903 122 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms