Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RAB9AP1-201ENST00000449393 573 ntBASIC3.63□□□□□ -1.83
CDH3P22223 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH3P22223 AC091564.1-201ENST00000464563 479 ntBASIC3.63□□□□□ -1.83
CDH3P22223 RPS27AP1-201ENST00000475545 471 ntBASIC3.63□□□□□ -1.83
CDH3P22223 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH3P22223 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH3P22223 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH3P22223 AC006499.2-201ENST00000513470 337 ntBASIC3.63□□□□□ -1.83
CDH3P22223 AC104986.1-201ENST00000517978 436 ntBASIC3.63□□□□□ -1.83
CDH3P22223 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH3P22223 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH3P22223 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH3P22223 MTND2P38-201ENST00000522536 667 ntBASIC3.63□□□□□ -1.83
CDH3P22223 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH3P22223 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH3P22223 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH3P22223 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 AC025588.3-201ENST00000604182 274 ntBASIC3.63□□□□□ -1.83
CDH3P22223 MIR92B-201ENST00000607575 96 ntBASIC3.63□□□□□ -1.83
CDH3P22223 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 AC009318.4-201ENST00000620496 486 ntBASIC3.63□□□□□ -1.83
CDH3P22223 U6.101-201ENST00000637707 76 ntBASIC3.63□□□□□ -1.83
CDH3P22223 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH3P22223 ZNF826P-207ENST00000622273 1910 ntBASIC3.63□□□□□ -1.83
CDH3P22223 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 AP001350.1-201ENST00000601906 1524 ntBASIC3.63□□□□□ -1.83
CDH3P22223 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 AC093010.3-201ENST00000570269 15214 ntBASIC3.63□□□□□ -1.83
CDH3P22223 ZNF285B-201ENST00000561698 1767 ntBASIC3.63□□□□□ -1.83
CDH3P22223 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CDH3P22223 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH3P22223 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH3P22223 AL391994.1-201ENST00000254724 282 ntBASIC3.62□□□□□ -1.83
CDH3P22223 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDH3P22223 SNORA4.1-201ENST00000364263 144 ntBASIC3.62□□□□□ -1.83
CDH3P22223 RNU6-730P-201ENST00000383954 104 ntBASIC3.62□□□□□ -1.83
CDH3P22223 MIR670-201ENST00000390142 98 ntBASIC3.62□□□□□ -1.83
CDH3P22223 RPL21P17-201ENST00000397467 475 ntBASIC3.62□□□□□ -1.83
CDH3P22223 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH3P22223 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
CDH3P22223 PIGPP2-201ENST00000411569 458 ntBASIC3.62□□□□□ -1.83
CDH3P22223 OFD1P18Y-201ENST00000420889 959 ntBASIC3.62□□□□□ -1.83
CDH3P22223 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH3P22223 MTCYBP3-201ENST00000445588 1137 ntBASIC3.62□□□□□ -1.83
CDH3P22223 VN1R34P-201ENST00000447387 883 ntBASIC3.62□□□□□ -1.83
CDH3P22223 ART2BP-201ENST00000453501 499 ntBASIC3.62□□□□□ -1.83
CDH3P22223 RPS3AP22-201ENST00000488297 769 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH3P22223 MTCO3P44-201ENST00000510977 541 ntBASIC3.62□□□□□ -1.83
CDH3P22223 RAC1P2-201ENST00000511164 579 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH3P22223 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH3P22223 RN7SKP60-201ENST00000516985 239 ntBASIC3.62□□□□□ -1.83
CDH3P22223 IGKV2D-36-201ENST00000518643 226 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AC093331.1-201ENST00000521474 169 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH3P22223 MIR4474-201ENST00000579189 78 ntBASIC3.62□□□□□ -1.83
CDH3P22223 MIR4999-201ENST00000585029 91 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.62□□□□□ -1.83
CDH3P22223 VN1R90P-201ENST00000595717 726 ntBASIC3.62□□□□□ -1.83
CDH3P22223 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH3P22223 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH3P22223 AC018638.7-201ENST00000605836 1114 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AC243773.3-201ENST00000613270 256 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AL354976.1-201ENST00000613843 387 ntBASIC3.62□□□□□ -1.83
CDH3P22223 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH3P22223 AC090116.1-201ENST00000615679 446 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AC022079.1-201ENST00000621546 602 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AC012442.3-202ENST00000636742 206 ntBASIC3.62□□□□□ -1.83
CDH3P22223 MTND2P41-201ENST00000637599 773 ntBASIC3.62□□□□□ -1.83
CDH3P22223 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH3P22223 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.62□□□□□ -1.83
CDH3P22223 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH3P22223 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH3P22223 OR5BR1P-201ENST00000524992 1330 ntBASIC3.62□□□□□ -1.83
CDH3P22223 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH3P22223 RNU6-374P-201ENST00000364146 108 ntBASIC3.61□□□□□ -1.83
CDH3P22223 RNU6-1200P-201ENST00000384162 107 ntBASIC3.61□□□□□ -1.83
CDH3P22223 SNORD3H-201ENST00000384486 214 ntBASIC3.61□□□□□ -1.83
CDH3P22223 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH3P22223 AL049545.1-201ENST00000401856 572 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AL035423.1-201ENST00000420331 213 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 AL593851.1-201ENST00000426171 157 ntBASIC3.61□□□□□ -1.83
CDH3P22223 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 AL354941.1-201ENST00000438600 464 ntBASIC3.61□□□□□ -1.83
CDH3P22223 MTCYBP34-201ENST00000439552 670 ntBASIC3.61□□□□□ -1.83
CDH3P22223 MTND5P2-201ENST00000442927 1142 ntBASIC3.61□□□□□ -1.83
CDH3P22223 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH3P22223 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.61□□□□□ -1.83
CDH3P22223 AC022034.3-201ENST00000471393 478 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC084198.1-201ENST00000477747 402 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms