Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CYCSP29-201ENST00000533731 318 ntBASIC3.91□□□□□ -1.78
PCNAP12004 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCNAP12004 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.91□□□□□ -1.78
PCNAP12004 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.91□□□□□ -1.78
PCNAP12004 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.91□□□□□ -1.78
PCNAP12004 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.91□□□□□ -1.78
PCNAP12004 AC107954.1-201ENST00000565906 727 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AC091489.2-201ENST00000566263 604 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.91□□□□□ -1.78
PCNAP12004 AL669831.4-202ENST00000590817 238 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.91□□□□□ -1.78
PCNAP12004 AC022146.1-201ENST00000595307 847 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AP000403.1-201ENST00000603349 851 ntBASIC3.91□□□□□ -1.78
PCNAP12004 BCRP9-201ENST00000605312 388 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AC027807.2-201ENST00000616099 408 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AL591424.2-201ENST00000617023 128 ntBASIC3.91□□□□□ -1.78
PCNAP12004 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AL445567.2-201ENST00000618935 498 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AF127577.6-201ENST00000623352 2191 ntBASIC3.91□□□□□ -1.78
PCNAP12004 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PCNAP12004 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCNAP12004 AC097714.1-201ENST00000511272 1647 ntBASIC3.91□□□□□ -1.78
PCNAP12004 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.91□□□□□ -1.78
PCNAP12004 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.91□□□□□ -1.78
PCNAP12004 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCNAP12004 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.9□□□□□ -1.78
PCNAP12004 FAM91A3P-201ENST00000456826 2544 ntBASIC3.9□□□□□ -1.78
PCNAP12004 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCNAP12004 MTCO1P24-201ENST00000515438 1558 ntBASIC3.9□□□□□ -1.78
PCNAP12004 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.9□□□□□ -1.79
PCNAP12004 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCNAP12004 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCNAP12004 SNORA60-201ENST00000362396 134 ntBASIC3.9□□□□□ -1.79
PCNAP12004 Y_RNA.201-201ENST00000364052 96 ntBASIC3.9□□□□□ -1.79
PCNAP12004 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 RNU6-356P-201ENST00000384140 107 ntBASIC3.9□□□□□ -1.79
PCNAP12004 Z98941.1-201ENST00000407764 100 ntBASIC3.9□□□□□ -1.79
PCNAP12004 RN7SKP266-201ENST00000410232 287 ntBASIC3.9□□□□□ -1.79
PCNAP12004 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 AL389915.1-201ENST00000422463 466 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.9□□□□□ -1.79
PCNAP12004 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.9□□□□□ -1.79
PCNAP12004 SDCBPP1-201ENST00000440192 890 ntBASIC3.9□□□□□ -1.79
PCNAP12004 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 HMGN2P21-201ENST00000447764 270 ntBASIC3.9□□□□□ -1.79
PCNAP12004 RPL7P52-201ENST00000449200 742 ntBASIC3.9□□□□□ -1.79
PCNAP12004 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 SUMO2P2-201ENST00000456482 255 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AL136097.1-201ENST00000456945 913 ntBASIC3.9□□□□□ -1.79
PCNAP12004 RPS4XP10-201ENST00000465034 731 ntBASIC3.9□□□□□ -1.79
PCNAP12004 RN7SL330P-201ENST00000469709 307 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC116337.2-201ENST00000477662 156 ntBASIC3.9□□□□□ -1.79
PCNAP12004 PPIAP15-201ENST00000479662 484 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
PCNAP12004 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 AC106872.3-201ENST00000495104 446 ntBASIC3.9□□□□□ -1.79
PCNAP12004 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCNAP12004 UBE2CP3-201ENST00000502715 450 ntBASIC3.9□□□□□ -1.79
PCNAP12004 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 AC116347.2-201ENST00000514912 523 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC022447.1-201ENST00000515358 464 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC025881.1-201ENST00000518851 512 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 AP003730.1-201ENST00000524605 285 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.9□□□□□ -1.79
PCNAP12004 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 GNRHR2P1-201ENST00000555315 631 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.9□□□□□ -1.79
PCNAP12004 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.9□□□□□ -1.79
PCNAP12004 AC006362.1-201ENST00000567392 174 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.9□□□□□ -1.79
PCNAP12004 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCNAP12004 MIR4307-201ENST00000582802 84 ntBASIC3.9□□□□□ -1.79
PCNAP12004 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCNAP12004 PRELID3BP8-201ENST00000604148 295 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC128687.1-201ENST00000605304 619 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC012360.2-201ENST00000609349 391 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC128687.2-201ENST00000609657 566 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.9□□□□□ -1.79
PCNAP12004 AC048347.1-201ENST00000624621 427 ntBASIC3.9□□□□□ -1.79
PCNAP12004 AC090582.1-201ENST00000636321 199 ntBASIC3.9□□□□□ -1.79
PCNAP12004 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCNAP12004 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.9□□□□□ -1.79
PCNAP12004 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCNAP12004 AC091152.2-201ENST00000591628 2569 ntBASIC3.9□□□□□ -1.79
PCNAP12004 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCNAP12004 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCNAP12004 RNU4-24P-201ENST00000364565 139 ntBASIC3.89□□□□□ -1.79
PCNAP12004 RNU6-769P-201ENST00000384407 104 ntBASIC3.89□□□□□ -1.79
PCNAP12004 Y_RNA.553-201ENST00000384670 102 ntBASIC3.89□□□□□ -1.79
PCNAP12004 MIR1250-201ENST00000408098 113 ntBASIC3.89□□□□□ -1.79
PCNAP12004 MIR1251-201ENST00000408552 70 ntBASIC3.89□□□□□ -1.79
PCNAP12004 MTCYBP24-201ENST00000420387 1106 ntBASIC3.89□□□□□ -1.79
PCNAP12004 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.89□□□□□ -1.79
PCNAP12004 AC011742.1-201ENST00000431448 434 ntBASIC3.89□□□□□ -1.79
PCNAP12004 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms