Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.7□□□□□ -1.66
PRPF3O43395 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF3O43395 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF3O43395 AC025627.2-201ENST00000576220 160 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
PRPF3O43395 MIR6867-201ENST00000610636 67 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 MIR4727-201ENST00000622232 55 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AC090582.1-201ENST00000636321 199 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 MTCO1P9-201ENST00000505577 1534 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.7□□□□□ -1.66
PRPF3O43395 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF3O43395 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PRPF3O43395 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF3O43395 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.69□□□□□ -1.66
PRPF3O43395 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PRPF3O43395 SNORD35B-201ENST00000363660 87 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 HMGN2P21-201ENST00000447764 270 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC104308.1-201ENST00000454621 333 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.69□□□□□ -1.66
PRPF3O43395 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF3O43395 RPS7P7-201ENST00000463499 571 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 RPL23AP2-201ENST00000471227 466 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 RN7SL271P-201ENST00000487601 295 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC078817.1-201ENST00000492623 435 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 RPL7P23-201ENST00000493874 747 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 PAICSP4-201ENST00000517543 1253 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC022968.1-201ENST00000567372 442 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC136624.4-201ENST00000573044 370 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC010928.3-201ENST00000587712 541 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF3O43395 RSL24D1P11-201ENST00000591045 491 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 SNRPGP15-201ENST00000600149 222 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC119751.7-201ENST00000600494 245 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC008638.3-201ENST00000603341 463 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AL591034.3-201ENST00000605511 685 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC012603.1-201ENST00000606424 528 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC109347.2-201ENST00000610220 349 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC138749.5-201ENST00000611461 208 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC027807.2-201ENST00000616099 408 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC116165.2-201ENST00000616705 206 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 MIR6130-201ENST00000619419 109 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 AC018755.4-201ENST00000619715 454 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF3O43395 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF3O43395 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF3O43395 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF3O43395 AC012020.1-201ENST00000624541 1728 ntBASIC4.69□□□□□ -1.66
PRPF3O43395 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF3O43395 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.69□□□□□ -1.66
PRPF3O43395 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PRPF3O43395 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF3O43395 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF3O43395 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF3O43395 SNORA70.2-201ENST00000364506 135 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF3O43395 RNU6-533P-201ENST00000384144 107 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF3O43395 SNORA11-201ENST00000408789 128 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF3O43395 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF3O43395 RPL21P112-201ENST00000434403 463 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 USP9YP7-201ENST00000436723 430 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 RPL35AP22-201ENST00000436855 335 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 RPL22P17-201ENST00000438729 315 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 GDI2P2-201ENST00000445131 608 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF3O43395 NDUFS5P3-201ENST00000450668 321 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 USP9YP32-201ENST00000452432 430 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF3O43395 RPL7P24-201ENST00000493052 752 ntBASIC4.68□□□□□ -1.66
PRPF3O43395 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF3O43395 AP003497.1-201ENST00000528472 562 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms