Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNA5SP239-201ENST00000410218 129 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 VN1R31P-201ENST00000417498 730 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 PTP4A1P7-201ENST00000423476 514 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 AL590399.6-201ENST00000446396 307 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 MRPL50P4-201ENST00000446432 475 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 CCNHP1-201ENST00000513311 678 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2□□□□□ -2.09
COL6A6A6NMZ7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2□□□□□ -2.09
COL6A6A6NMZ7 NDUFA5P6-201ENST00000542110 379 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2□□□□□ -2.09
COL6A6A6NMZ7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2□□□□□ -2.09
COL6A6A6NMZ7 AL450489.1-201ENST00000612071 468 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 RPL23AP61-201ENST00000623642 466 ntBASIC2□□□□□ -2.09
COL6A6A6NMZ7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2□□□□□ -2.09
COL6A6A6NMZ7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 AL356280.1-201ENST00000603614 379 ntBASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 AC245100.2-201ENST00000454544 1679 ntBASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 AC066616.2-201ENST00000559334 1481 ntBASIC1.99□□□□□ -2.09
COL6A6A6NMZ7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 HMGB3P10-201ENST00000434734 572 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AL138787.1-202ENST00000437804 898 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC021087.2-201ENST00000504656 1203 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 SNORD114-26-201ENST00000363543 72 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 RNU6-1263P-201ENST00000384601 106 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 RNU6-178P-201ENST00000384631 104 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 MIR613-201ENST00000385248 95 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AL590084.1-201ENST00000407885 387 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 PTP4A1P1-201ENST00000420539 515 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 RPL7P54-201ENST00000438336 674 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 DNAJC19P4-201ENST00000440115 345 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC135999.1-201ENST00000478962 479 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AC068305.1-201ENST00000497406 726 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AP001960.1-201ENST00000506494 658 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 SNORA4-201ENST00000584302 138 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 EXOC5P1-201ENST00000510543 1969 ntBASIC1.98□□□□□ -2.09
COL6A6A6NMZ7 RN7SKP226-201ENST00000364912 300 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 BTF3P4-201ENST00000418852 495 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 ATG3P1-201ENST00000419507 911 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 NPM1P52-201ENST00000518264 846 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC234775.3-201ENST00000564612 656 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 CD24P2-201ENST00000565486 219 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC017076.1-201ENST00000607613 578 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 RNA5SP129-201ENST00000410276 118 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AL034379.1-201ENST00000423216 253 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AL591719.1-201ENST00000444669 744 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 TVP23BP2-201ENST00000455082 615 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC140059.1-201ENST00000489238 361 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC026412.2-201ENST00000512270 1075 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 OR4A45P-201ENST00000529954 901 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC008083.2-201ENST00000546707 476 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 OR4T1P-201ENST00000554933 911 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 AL356266.1-201ENST00000623311 483 ntBASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL6A6A6NMZ7 RNU6-697P-201ENST00000363348 107 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AL606490.7-201ENST00000433136 191 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AL357520.1-201ENST00000441557 453 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 OR7L1P-201ENST00000456181 380 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 RPL38P4-201ENST00000502376 214 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms