Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 NR1H5P-201ENST00000452683 1377 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 SNORA67.5-201ENST00000391036 107 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.09□□□□□ -2.07
CNOT1A5YKK6 RPL38P4-201ENST00000502376 214 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.09□□□□□ -2.07
CNOT1A5YKK6 PDCD5P1-201ENST00000543528 309 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AC012119.1-201ENST00000603184 222 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AC017076.1-201ENST00000607613 578 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AC002064.3-201ENST00000623448 346 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 MIR3199-2-201ENST00000636243 86 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AP001486.2-201ENST00000561652 5113 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CNOT1A5YKK6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CNOT1A5YKK6 AC016717.2-201ENST00000609089 5141 ntBASIC2.09□□□□□ -2.07
CNOT1A5YKK6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CNOT1A5YKK6 MIR221-201ENST00000385135 110 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 AL159169.1-201ENST00000421119 127 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 AC098826.1-201ENST00000433943 471 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 RPS4XP11-201ENST00000446897 772 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 AP000926.1-201ENST00000479573 241 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 DYNLL1P6-201ENST00000503440 264 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 RPS3AP4-201ENST00000555161 764 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 AGGF1P8-201ENST00000562979 1000 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 MIR7153-201ENST00000637758 57 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
CNOT1A5YKK6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CNOT1A5YKK6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CNOT1A5YKK6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CNOT1A5YKK6 MTND5P28-201ENST00000438005 1594 ntBASIC2.09□□□□□ -2.08
CNOT1A5YKK6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 HMGN1P33-201ENST00000432945 451 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 RNU7-170P-201ENST00000459303 61 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 RNU6-1334P-201ENST00000516032 105 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 RNU6-1231P-201ENST00000517185 103 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 OR4A45P-201ENST00000529954 901 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 AC011611.5-201ENST00000552477 578 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 AL022099.1-201ENST00000604551 712 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 SAGE4P-201ENST00000442271 3381 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 RPS15AP28-201ENST00000435088 386 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 NDUFB4P6-201ENST00000436819 366 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 AC092798.1-201ENST00000458542 409 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 RNA5SP61-201ENST00000516453 100 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 RNU6-964P-201ENST00000516524 69 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 ARL2BPP2-201ENST00000550907 489 ntBASIC2.08□□□□□ -2.08
CNOT1A5YKK6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CNOT1A5YKK6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 MIR21-201ENST00000362134 72 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 RN7SKP226-201ENST00000364912 300 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AL606490.7-201ENST00000433136 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC245517.2-201ENST00000442890 346 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC083760.1-201ENST00000589621 670 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AP005901.5-201ENST00000545779 1796 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC233981.2-201ENST00000611524 1614 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC010329.2-201ENST00000595195 2737 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 RNU2-2P-201ENST00000410396 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AP001542.2-201ENST00000593141 364 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
CNOT1A5YKK6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CNOT1A5YKK6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CNOT1A5YKK6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms