Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 snoU13.15-201ENST00000459407 104 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 RPL21P104-201ENST00000464143 478 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 HMGN2P13-201ENST00000476476 274 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 RN7SL297P-201ENST00000483161 293 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 RNA5SP76-201ENST00000516277 87 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AF279873.1-201ENST00000523393 313 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 OR7K1P-201ENST00000546439 926 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AC010620.2-201ENST00000600135 313 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AL109653.1-201ENST00000603091 248 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 SNORA35B-201ENST00000607417 129 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AC009159.1-201ENST00000618386 642 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 BTF3P7-201ENST00000407097 488 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 RN7SKP140-201ENST00000411196 284 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 RFESDP1-201ENST00000422350 461 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AL031736.2-201ENST00000426573 787 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AC098826.1-201ENST00000433943 471 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 MTCYBP29-201ENST00000436327 1006 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 ELOCP11-201ENST00000436690 332 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 Z99127.2-201ENST00000441426 334 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 ELOCP16-201ENST00000444494 332 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 RPL7P52-201ENST00000449200 742 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 FDX1P2-201ENST00000450769 375 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AC008571.1-201ENST00000467232 300 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 RPS27AP9-201ENST00000477681 438 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AL024509.2-201ENST00000493462 493 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AC110792.2-201ENST00000510278 224 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 RNU6-826P-201ENST00000516827 104 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AC002076.2-201ENST00000617362 122 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 MIR6873-201ENST00000622788 63 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 AL355596.1-201ENST00000565399 3996 ntBASIC2.16□□□□□ -2.06
TRAV17A0A0B4J275 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
TRAV17A0A0B4J275 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TRAV17A0A0B4J275 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AL158825.1-201ENST00000414735 521 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AC244098.2-201ENST00000422068 99 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 RPS12P2-201ENST00000439728 269 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 RNU7-27P-201ENST00000459281 62 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 RPL23AP49-201ENST00000492925 468 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AC092436.1-201ENST00000506450 503 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AP001317.1-201ENST00000531194 960 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 OR5BN1P-201ENST00000532955 829 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AP000916.1-201ENST00000533869 835 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AC008083.2-201ENST00000546707 476 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AC105137.2-201ENST00000569073 466 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 AC069304.3-201ENST00000603938 1084 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 RPL23AP88-201ENST00000605759 454 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 MIR7843-201ENST00000622274 79 ntBASIC2.15□□□□□ -2.07
TRAV17A0A0B4J275 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 VTRNA1-1-201ENST00000363120 99 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 RAP1BP1-201ENST00000412709 553 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 MTATP6P11-201ENST00000428071 670 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC096638.1-201ENST00000444678 216 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 OR7L1P-201ENST00000456181 380 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 RPL23AP55-201ENST00000498163 452 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 EEF1A1P37-201ENST00000522748 715 ntBASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV17A0A0B4J275 HSPE1P20-201ENST00000538133 289 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms