Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC017100.2-201ENST00000584628 355 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 RPL23AP78-201ENST00000599928 470 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC103881.1-201ENST00000603476 538 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AL009028.1-201ENST00000604895 802 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 AC135507.2-201ENST00000612443 309 ntBASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HLA-DRB4X5D2U9 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 RNA5SP139-201ENST00000364340 117 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 RNU1-138P-201ENST00000384093 164 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 RNU6-31P-201ENST00000384388 108 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 RNU6-452P-201ENST00000384406 107 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 MIR9-1-201ENST00000385198 89 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 RNA5SP181-201ENST00000410246 98 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AL137014.1-201ENST00000420490 1226 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 RPL23AP74-201ENST00000437246 471 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC105272.1-201ENST00000438604 198 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC107083.1-201ENST00000439643 279 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC015908.1-201ENST00000478739 476 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 KC877373.1-201ENST00000479066 408 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 SETP6-201ENST00000479329 568 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 RPS3AP14-201ENST00000483907 780 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC010625.1-201ENST00000511296 403 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC067904.2-201ENST00000517322 1283 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AL133271.1-201ENST00000538229 291 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC007954.1-201ENST00000554198 494 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC010620.2-201ENST00000600135 313 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC005000.2-201ENST00000605468 310 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC024560.3-201ENST00000608482 349 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC011890.2-201ENST00000613393 294 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AL137790.1-201ENST00000634283 177 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 TAB3P1-202ENST00000452645 1634 ntBASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DRB4X5D2U9 AC080100.1-201ENST00000624239 5356 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 MIR142-201ENST00000384835 87 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RNA5SP252-201ENST00000391131 119 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 UQCRFS1P3-201ENST00000407697 385 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AC092447.6-201ENST00000414578 210 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RPL21P32-201ENST00000419877 477 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RPL7P44-201ENST00000424827 742 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AC112220.1-201ENST00000434628 355 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RPS12P2-201ENST00000439728 269 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RNA5SP310-201ENST00000459084 116 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RPS27P27-201ENST00000498779 255 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AC097462.2-201ENST00000504623 481 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 MTND3P24-201ENST00000506306 329 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RAC1P5-201ENST00000512182 576 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 SNORA31.11-201ENST00000516528 139 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 SNORA31.21-201ENST00000517180 77 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 RN7SKP40-201ENST00000517211 242 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 CYCSP39-201ENST00000565821 309 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 MIR5194-201ENST00000582634 120 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 ELOCP29-201ENST00000588193 334 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 GLUD1P4-201ENST00000590914 418 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AC103798.2-201ENST00000624292 632 ntBASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DRB4X5D2U9 NSRP1P1-201ENST00000444067 1693 ntBASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 AC011460.1-201ENST00000636268 1834 ntBASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 RNVU1-3-201ENST00000364313 161 ntBASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 RNU6-7-201ENST00000364784 107 ntBASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 RNU6-8-201ENST00000365467 107 ntBASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 ANAPC10P1-201ENST00000395991 556 ntBASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DRB4X5D2U9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms