Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 ARL2BPP5-201ENST00000523141 481 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 OR4P1P-201ENST00000530808 1136 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC004024.1-201ENST00000549244 247 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AP005205.1-201ENST00000563503 508 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AL020997.3-201ENST00000602843 359 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC009570.1-201ENST00000609599 745 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC009464.1-201ENST00000615731 469 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC009318.4-201ENST00000620496 486 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC091046.2-201ENST00000620775 665 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC026422.1-201ENST00000623961 452 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 OR5H2-201ENST00000355273 945 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 RNU6-173P-201ENST00000364215 104 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 RNU6-481P-201ENST00000384194 107 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 Z99755.1-201ENST00000414048 380 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 SSXP9-201ENST00000417503 292 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 UBE2V1P6-201ENST00000430840 422 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AL831737.1-201ENST00000441288 271 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 HSFY3P-201ENST00000444242 1191 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 PRDX3P4-201ENST00000470828 747 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC015908.1-201ENST00000478739 476 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 RPL30P14-201ENST00000482744 348 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC108078.3-201ENST00000502633 489 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC011352.3-201ENST00000505162 593 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 MIR2276-201ENST00000516886 89 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AP000790.1-201ENST00000528891 737 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC005476.1-201ENST00000554427 397 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 DNAJC8P1-201ENST00000554535 372 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 EIF4BP1-201ENST00000554881 351 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 NIFKP8-201ENST00000560500 874 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 SNORD39.3-201ENST00000584451 71 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC022509.4-201ENST00000621404 572 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 AC097460.3-201ENST00000623099 442 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
TM9SF3Q9HD45 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC010733.2-201ENST00000589496 5702 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC245291.1-201ENST00000419501 328 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 BX890604.2-201ENST00000427883 474 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 PABPC1P3-201ENST00000469174 459 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC006445.1-201ENST00000491925 405 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC093767.1-201ENST00000504523 156 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC090136.1-201ENST00000520009 240 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 OR10V3P-201ENST00000525712 725 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AL451007.1-201ENST00000595491 289 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC124312.4-201ENST00000605533 310 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 NUP58P1-201ENST00000502546 1738 ntBASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TM9SF3Q9HD45 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TM9SF3Q9HD45 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TM9SF3Q9HD45 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TM9SF3Q9HD45 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TM9SF3Q9HD45 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms