Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 UBDP1-202ENST00000457888 382 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 snoU13.8-201ENST00000458890 104 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 IGKV2D-23-201ENST00000518179 286 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 VN1R82P-201ENST00000601481 356 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC103710.3-201ENST00000608157 948 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AP000240.1-201ENST00000609910 452 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL355810.1-201ENST00000614629 552 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AP000484.1-201ENST00000620067 1252 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL034408.1-202ENST00000636088 415 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 ZNF876P-202ENST00000398732 1485 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC007256.1-201ENST00000392253 2765 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 SNORA71.3-201ENST00000362582 128 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 SNORA73.2-201ENST00000364946 201 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 U8.11-201ENST00000384699 133 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 U8.12-201ENST00000384701 133 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AL953862.1-201ENST00000423016 168 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 YME1L1P1-201ENST00000429435 297 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 MTCYBP45-201ENST00000435243 565 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 MTCYBP31-201ENST00000438855 1122 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 CFTRP1-201ENST00000456646 183 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 U8.18-201ENST00000459285 133 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 MEMO1P3-201ENST00000459811 302 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 UBE2CP3-201ENST00000502715 450 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 RN7SKP83-201ENST00000516512 178 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AL121576.1-201ENST00000556055 276 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 MIR4644-201ENST00000579929 84 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AL022099.1-201ENST00000604551 712 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AC244100.1-202ENST00000621554 382 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 AC004777.1-201ENST00000624317 287 ntBASIC3.84□□□□□ -1.79
PRPF39Q86UA1 MAPK10-372ENST00000641954 3413 ntBASIC3.84□□□□□ -1.8
PRPF39Q86UA1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
PRPF39Q86UA1 SGO1P2-201ENST00000429458 1589 ntBASIC3.84□□□□□ -1.8
PRPF39Q86UA1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
PRPF39Q86UA1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRPF39Q86UA1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.8
PRPF39Q86UA1 AC073073.2-201ENST00000609827 2578 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 FAM133CP-201ENST00000332869 704 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AP000567.1-201ENST00000406413 156 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 RPL30P2-201ENST00000414021 291 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 EZH2P1-201ENST00000431167 291 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 Z80107.1-201ENST00000436830 412 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 MTCO2P20-201ENST00000437339 673 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 SNRPEP7-201ENST00000438350 220 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AL353691.1-201ENST00000451332 387 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 SNORD11.1-201ENST00000459482 85 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AL133162.1-201ENST00000463228 453 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 RN7SKP13-201ENST00000515933 244 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC026403.1-201ENST00000518938 295 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 OR6C7P-201ENST00000547875 934 ntBASIC3.83□□□□□ -1.8
PRPF39Q86UA1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF39Q86UA1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms