Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC011816.1-201ENST00000441346 546 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AL121871.1-201ENST00000443413 436 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AL590664.1-201ENST00000448065 339 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 HMGB1P26-201ENST00000452520 628 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AL358832.1-201ENST00000497800 389 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC016065.2-201ENST00000514530 444 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 RNU6-1004P-201ENST00000516584 111 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC100870.1-201ENST00000522035 505 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC010306.1-201ENST00000523223 1117 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 OR10V3P-201ENST00000525712 725 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 BX323046.1-201ENST00000610145 535 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 VN1R7P-201ENST00000619242 903 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC020763.5-201ENST00000623298 430 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC095031.1-201ENST00000623685 672 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC079597.1-201ENST00000624306 508 ntBASIC2.32□□□□□ -2.04
CCDC58Q4VC31 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC58Q4VC31 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 CUL1P1-201ENST00000509510 2425 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 PGBD4P3-201ENST00000440731 581 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AL031659.1-201ENST00000447075 539 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 SNORA67.7-201ENST00000516664 135 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC093014.1-201ENST00000548926 724 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC090616.3-201ENST00000582184 217 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AL359535.1-201ENST00000612100 1087 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC006133.1-201ENST00000617106 264 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 ZNF658B-202ENST00000615961 3375 ntBASIC2.31□□□□□ -2.04
CCDC58Q4VC31 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC58Q4VC31 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 Y_RNA.126-201ENST00000363382 111 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 RPS4XP3-201ENST00000398541 413 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 RPLP0P7-201ENST00000416050 667 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 WARS2P1-201ENST00000429678 537 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 CACYBPP2-201ENST00000453625 678 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 snoU13.3-201ENST00000459441 104 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AC107954.1-201ENST00000565906 727 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 RPL23AP92-201ENST00000603609 255 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AL136363.1-201ENST00000605349 337 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 AC110079.1-202ENST00000635213 138 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 CU459211.1-201ENST00000635667 749 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.3□□□□□ -2.04
CCDC58Q4VC31 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CCDC58Q4VC31 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AP000526.1-201ENST00000603308 1388 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 RNA5SP374-201ENST00000362939 125 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 U8.8-201ENST00000365399 135 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 SNORA51.11-201ENST00000384442 131 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 RNVU1-14-201ENST00000384770 164 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 MIR9-1-201ENST00000385198 89 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 EEF1A1P41-201ENST00000414667 207 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AL512649.1-201ENST00000428997 581 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms