Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC092447.10-201ENST00000620607 1652 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC005832.2-201ENST00000538921 1430 ntBASIC3.81□□□□□ -1.8
CDH12P55289 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 AC022893.2-201ENST00000564832 3296 ntBASIC3.81□□□□□ -1.8
CDH12P55289 RNA5SP502-201ENST00000362694 119 ntBASIC3.81□□□□□ -1.8
CDH12P55289 Y_RNA.46-201ENST00000362695 102 ntBASIC3.81□□□□□ -1.8
CDH12P55289 Y_RNA.234-201ENST00000364409 97 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 RNU6-339P-201ENST00000384310 107 ntBASIC3.81□□□□□ -1.8
CDH12P55289 Y_RNA.548-201ENST00000384656 105 ntBASIC3.81□□□□□ -1.8
CDH12P55289 Y_RNA.582-201ENST00000391023 95 ntBASIC3.81□□□□□ -1.8
CDH12P55289 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 FAR2P2-201ENST00000413041 594 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 RAC1P3-201ENST00000416129 580 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH12P55289 AL391219.1-201ENST00000422570 483 ntBASIC3.81□□□□□ -1.8
CDH12P55289 PSMA2P3-201ENST00000429685 675 ntBASIC3.81□□□□□ -1.8
CDH12P55289 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH12P55289 RPL23AP46-201ENST00000438548 490 ntBASIC3.81□□□□□ -1.8
CDH12P55289 MTND6P13-201ENST00000443510 523 ntBASIC3.81□□□□□ -1.8
CDH12P55289 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH12P55289 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH12P55289 NDUFS5P3-201ENST00000450668 321 ntBASIC3.81□□□□□ -1.8
CDH12P55289 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 RPL36AP13-201ENST00000457490 317 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC093899.1-201ENST00000457984 376 ntBASIC3.81□□□□□ -1.8
CDH12P55289 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH12P55289 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH12P55289 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH12P55289 AF213884.1-201ENST00000488102 463 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC013356.1-201ENST00000489027 564 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC034222.1-201ENST00000494052 532 ntBASIC3.81□□□□□ -1.8
CDH12P55289 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.81□□□□□ -1.8
CDH12P55289 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH12P55289 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH12P55289 RNU6-714P-201ENST00000516963 103 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH12P55289 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH12P55289 RPL21P5-201ENST00000554662 472 ntBASIC3.81□□□□□ -1.8
CDH12P55289 GNRHR2P1-201ENST00000555315 631 ntBASIC3.81□□□□□ -1.8
CDH12P55289 RPL23AP87-202ENST00000573039 466 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AC137800.2-201ENST00000574375 120 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH12P55289 AC068790.5-201ENST00000602741 355 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AL139286.1-201ENST00000604465 483 ntBASIC3.81□□□□□ -1.8
CDH12P55289 AP003117.2-201ENST00000606010 545 ntBASIC3.81□□□□□ -1.8
CDH12P55289 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.81□□□□□ -1.8
CDH12P55289 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 AP000843.1-201ENST00000624880 701 ntBASIC3.81□□□□□ -1.8
CDH12P55289 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH12P55289 AC099654.12-201ENST00000639868 649 ntBASIC3.81□□□□□ -1.8
CDH12P55289 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
CDH12P55289 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH12P55289 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CDH12P55289 MTND5P26-201ENST00000426018 1752 ntBASIC3.81□□□□□ -1.8
CDH12P55289 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH12P55289 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH12P55289 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CDH12P55289 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH12P55289 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH12P55289 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH12P55289 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
CDH12P55289 AL356489.2-201ENST00000566968 3528 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH12P55289 AC139713.2-214ENST00000642059 1811 ntBASIC3.8□□□□□ -1.8
CDH12P55289 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
CDH12P55289 Y_RNA.6-201ENST00000362350 114 ntBASIC3.8□□□□□ -1.8
CDH12P55289 RNY4P24-201ENST00000362735 96 ntBASIC3.8□□□□□ -1.8
CDH12P55289 RNA5SP513-201ENST00000364648 118 ntBASIC3.8□□□□□ -1.8
CDH12P55289 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH12P55289 AL356421.1-201ENST00000403255 413 ntBASIC3.8□□□□□ -1.8
CDH12P55289 RPL7P25-201ENST00000404151 721 ntBASIC3.8□□□□□ -1.8
CDH12P55289 RNU2-15P-201ENST00000410692 191 ntBASIC3.8□□□□□ -1.8
CDH12P55289 ELOCP19-201ENST00000411919 318 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH12P55289 RWDD4P2-201ENST00000426392 563 ntBASIC3.8□□□□□ -1.8
CDH12P55289 EZH2P1-201ENST00000431167 291 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH12P55289 AL356535.1-201ENST00000440335 398 ntBASIC3.8□□□□□ -1.8
CDH12P55289 RPL7P52-201ENST00000449200 742 ntBASIC3.8□□□□□ -1.8
CDH12P55289 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH12P55289 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH12P55289 snoU13.1-201ENST00000459157 104 ntBASIC3.8□□□□□ -1.8
CDH12P55289 AC109327.1-201ENST00000471666 403 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms