Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL109620.1-201ENST00000618738 1197 ntBASIC3.15□□□□□ -1.91
RETP07949 AC097460.3-201ENST00000623099 442 ntBASIC3.15□□□□□ -1.91
RETP07949 FAM157B-203ENST00000639350 358 ntBASIC3.15□□□□□ -1.91
RETP07949 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.15□□□□□ -1.91
RETP07949 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RETP07949 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RETP07949 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
RETP07949 AL512646.1-201ENST00000269395 1077 ntBASIC3.14□□□□□ -1.91
RETP07949 OR1S2-201ENST00000302592 978 ntBASIC3.14□□□□□ -1.91
RETP07949 MIR16-2-201ENST00000362117 81 ntBASIC3.14□□□□□ -1.91
RETP07949 ATP5F1P6-201ENST00000402768 767 ntBASIC3.14□□□□□ -1.91
RETP07949 AL158050.1-201ENST00000416077 457 ntBASIC3.14□□□□□ -1.91
RETP07949 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
RETP07949 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.14□□□□□ -1.91
RETP07949 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.14□□□□□ -1.91
RETP07949 AC012497.1-201ENST00000429392 575 ntBASIC3.14□□□□□ -1.91
RETP07949 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.14□□□□□ -1.91
RETP07949 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.14□□□□□ -1.91
RETP07949 NECAP1P2-201ENST00000455668 727 ntBASIC3.14□□□□□ -1.91
RETP07949 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.14□□□□□ -1.91
RETP07949 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.14□□□□□ -1.91
RETP07949 AC010306.1-201ENST00000523223 1117 ntBASIC3.14□□□□□ -1.91
RETP07949 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.14□□□□□ -1.91
RETP07949 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RETP07949 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
RETP07949 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RETP07949 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.14□□□□□ -1.91
RETP07949 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.14□□□□□ -1.91
RETP07949 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.14□□□□□ -1.91
RETP07949 AC104229.1-201ENST00000561364 255 ntBASIC3.14□□□□□ -1.91
RETP07949 AC005776.1-201ENST00000603164 290 ntBASIC3.14□□□□□ -1.91
RETP07949 AC073387.2-201ENST00000604797 784 ntBASIC3.14□□□□□ -1.91
RETP07949 AL450472.3-201ENST00000615578 367 ntBASIC3.14□□□□□ -1.91
RETP07949 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RETP07949 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.14□□□□□ -1.91
RETP07949 MFSD8-213ENST00000641134 1327 ntBASIC3.14□□□□□ -1.91
RETP07949 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
RETP07949 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
RETP07949 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RETP07949 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
RETP07949 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RETP07949 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RETP07949 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RETP07949 AL138880.1-201ENST00000405824 642 ntBASIC3.13□□□□□ -1.91
RETP07949 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RETP07949 RPL32P35-201ENST00000415214 394 ntBASIC3.13□□□□□ -1.91
RETP07949 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RETP07949 CST9LP2-201ENST00000437612 320 ntBASIC3.13□□□□□ -1.91
RETP07949 AC093156.1-201ENST00000440382 670 ntBASIC3.13□□□□□ -1.91
RETP07949 AL590399.6-201ENST00000446396 307 ntBASIC3.13□□□□□ -1.91
RETP07949 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.13□□□□□ -1.91
RETP07949 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 AC093278.1-201ENST00000494700 600 ntBASIC3.13□□□□□ -1.91
RETP07949 OR5H3P-201ENST00000502817 919 ntBASIC3.13□□□□□ -1.91
RETP07949 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 YWHAEP4-201ENST00000505390 198 ntBASIC3.13□□□□□ -1.91
RETP07949 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
RETP07949 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.13□□□□□ -1.91
RETP07949 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 AC016065.2-201ENST00000514530 444 ntBASIC3.13□□□□□ -1.91
RETP07949 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 AP001207.1-201ENST00000524051 481 ntBASIC3.13□□□□□ -1.91
RETP07949 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RETP07949 AC007536.1-201ENST00000533382 349 ntBASIC3.13□□□□□ -1.91
RETP07949 AC092451.2-201ENST00000538746 658 ntBASIC3.13□□□□□ -1.91
RETP07949 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.13□□□□□ -1.91
RETP07949 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.13□□□□□ -1.91
RETP07949 AC074029.1-201ENST00000552531 1044 ntBASIC3.13□□□□□ -1.91
RETP07949 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
RETP07949 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.13□□□□□ -1.91
RETP07949 AC106734.1-201ENST00000568646 663 ntBASIC3.13□□□□□ -1.91
RETP07949 MIR4319-201ENST00000577285 85 ntBASIC3.13□□□□□ -1.91
RETP07949 AC008687.2-201ENST00000597865 520 ntBASIC3.13□□□□□ -1.91
RETP07949 AC005014.3-201ENST00000605985 190 ntBASIC3.13□□□□□ -1.91
RETP07949 HMGN2P28-201ENST00000606102 262 ntBASIC3.13□□□□□ -1.91
RETP07949 AC096586.1-201ENST00000610267 561 ntBASIC3.13□□□□□ -1.91
RETP07949 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
RETP07949 FRG1HP-204ENST00000617940 757 ntBASIC3.13□□□□□ -1.91
RETP07949 AC006249.1-201ENST00000621223 471 ntBASIC3.13□□□□□ -1.91
RETP07949 AP003400.6-201ENST00000624698 740 ntBASIC3.13□□□□□ -1.91
RETP07949 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.13□□□□□ -1.91
RETP07949 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RETP07949 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.13□□□□□ -1.91
RETP07949 AL136520.1-201ENST00000600311 1322 ntBASIC3.13□□□□□ -1.91
RETP07949 AP001350.1-201ENST00000601906 1524 ntBASIC3.13□□□□□ -1.91
RETP07949 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RETP07949 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RETP07949 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RETP07949 U3.6-201ENST00000363622 211 ntBASIC3.12□□□□□ -1.91
RETP07949 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
RETP07949 SNORD15B-201ENST00000384714 146 ntBASIC3.12□□□□□ -1.91
RETP07949 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
RETP07949 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.12□□□□□ -1.91
RETP07949 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.12□□□□□ -1.91
RETP07949 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
RETP07949 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.12□□□□□ -1.91
RETP07949 RPL36P19-201ENST00000430744 301 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms