Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RTN3O95197 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTN3O95197 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTN3O95197 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RTN3O95197 AC087359.1-201ENST00000508335 1740 ntBASIC4.09□□□□□ -1.75
RTN3O95197 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.09□□□□□ -1.75
RTN3O95197 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.75
RTN3O95197 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RTN3O95197 AC116096.1-201ENST00000566804 2314 ntBASIC4.09□□□□□ -1.75
RTN3O95197 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.09□□□□□ -1.75
RTN3O95197 MIR30B-201ENST00000384850 88 ntBASIC4.09□□□□□ -1.75
RTN3O95197 CYCSP45-201ENST00000402289 315 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC098592.1-201ENST00000419352 333 ntBASIC4.09□□□□□ -1.75
RTN3O95197 RPL21P66-201ENST00000426566 466 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.09□□□□□ -1.75
RTN3O95197 MTCYBP45-201ENST00000435243 565 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.09□□□□□ -1.75
RTN3O95197 AL353691.1-201ENST00000451332 387 ntBASIC4.09□□□□□ -1.75
RTN3O95197 SNORA84-201ENST00000459229 133 ntBASIC4.09□□□□□ -1.75
RTN3O95197 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.09□□□□□ -1.75
RTN3O95197 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC098862.1-201ENST00000504991 413 ntBASIC4.09□□□□□ -1.75
RTN3O95197 BTF3L4P4-201ENST00000506381 449 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.09□□□□□ -1.75
RTN3O95197 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RTN3O95197 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.09□□□□□ -1.75
RTN3O95197 SAP18P1-201ENST00000512058 390 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC024589.1-201ENST00000512207 263 ntBASIC4.09□□□□□ -1.75
RTN3O95197 MTCYBP43-201ENST00000513621 740 ntBASIC4.09□□□□□ -1.75
RTN3O95197 RNA5SP164-201ENST00000516533 110 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.09□□□□□ -1.75
RTN3O95197 CR383656.7-201ENST00000548164 174 ntBASIC4.09□□□□□ -1.75
RTN3O95197 ELOCP32-201ENST00000548625 324 ntBASIC4.09□□□□□ -1.75
RTN3O95197 ZNF321P-202ENST00000550843 495 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.09□□□□□ -1.75
RTN3O95197 AC090888.2-201ENST00000559765 1144 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.09□□□□□ -1.75
RTN3O95197 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.09□□□□□ -1.75
RTN3O95197 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.09□□□□□ -1.75
RTN3O95197 AC012531.5-201ENST00000611375 151 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC005344.1-201ENST00000613391 459 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC008121.2-201ENST00000614647 523 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC018816.2-201ENST00000621460 353 ntBASIC4.09□□□□□ -1.75
RTN3O95197 AC017037.3-201ENST00000625016 472 ntBASIC4.09□□□□□ -1.75
RTN3O95197 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTN3O95197 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RTN3O95197 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTN3O95197 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RTN3O95197 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RTN3O95197 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RTN3O95197 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RTN3O95197 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN3O95197 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN3O95197 AL391994.1-201ENST00000254724 282 ntBASIC4.08□□□□□ -1.76
RTN3O95197 RNU1-18P-201ENST00000363062 164 ntBASIC4.08□□□□□ -1.76
RTN3O95197 RNU6-343P-201ENST00000364709 104 ntBASIC4.08□□□□□ -1.76
RTN3O95197 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN3O95197 RNU6-1200P-201ENST00000384162 107 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AL590704.1-201ENST00000402856 794 ntBASIC4.08□□□□□ -1.76
RTN3O95197 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN3O95197 RN7SKP156-201ENST00000410308 342 ntBASIC4.08□□□□□ -1.76
RTN3O95197 SNORA57.3-201ENST00000411095 141 ntBASIC4.08□□□□□ -1.76
RTN3O95197 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN3O95197 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN3O95197 OR1AA1P-201ENST00000419597 916 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AL137014.1-201ENST00000420490 1226 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AP004289.2-201ENST00000444413 1457 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN3O95197 MTCYBP3-201ENST00000445588 1137 ntBASIC4.08□□□□□ -1.76
RTN3O95197 PAXBP1P1-201ENST00000449315 447 ntBASIC4.08□□□□□ -1.76
RTN3O95197 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN3O95197 AC104563.1-201ENST00000476147 376 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AC092451.1-201ENST00000480211 153 ntBASIC4.08□□□□□ -1.76
RTN3O95197 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTN3O95197 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN3O95197 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN3O95197 TXNP6-201ENST00000510190 310 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN3O95197 AC010342.1-201ENST00000514047 877 ntBASIC4.08□□□□□ -1.76
RTN3O95197 RNU1-45P-201ENST00000517191 141 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AC023632.4-201ENST00000517783 191 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.08□□□□□ -1.76
RTN3O95197 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 ISCA1P3-201ENST00000577104 373 ntBASIC4.08□□□□□ -1.76
RTN3O95197 DUXAP11-201ENST00000603858 526 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AL031176.1-201ENST00000604554 466 ntBASIC4.08□□□□□ -1.76
RTN3O95197 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 AC128687.2-201ENST00000609657 566 ntBASIC4.08□□□□□ -1.76
RTN3O95197 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN3O95197 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN3O95197 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 AC073530.2-201ENST00000623987 261 ntBASIC4.08□□□□□ -1.76
RTN3O95197 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.08□□□□□ -1.76
RTN3O95197 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.08□□□□□ -1.76
RTN3O95197 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms