Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 MTND5P10-201ENST00000603719 1809 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 MTND5P1-201ENST00000445440 1375 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC079741.1-201ENST00000321498 212 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RNU6-1252P-201ENST00000363054 104 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RNU6-61P-201ENST00000365528 109 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.576-201ENST00000384781 102 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RPS16P5-201ENST00000406501 404 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RNU6-1304P-201ENST00000411374 106 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RPS12P5-201ENST00000423449 371 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC138761.5-201ENST00000433967 325 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AF228730.2-201ENST00000438784 848 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC005008.1-201ENST00000456151 612 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.653-201ENST00000459091 95 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RN7SL189P-201ENST00000468631 289 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC022133.1-201ENST00000490961 571 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC025164.1-201ENST00000496249 478 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RNU6-1092P-201ENST00000516955 87 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC090136.1-201ENST00000520009 240 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AP006289.1-201ENST00000538089 277 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 SETP7-201ENST00000552169 453 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 DNAJC8P1-201ENST00000554535 372 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC100830.2-201ENST00000581636 240 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 MIR5690-201ENST00000583739 73 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC022893.3-201ENST00000607665 437 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AL132822.1-201ENST00000617063 513 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 uc_338.22-201ENST00000622722 187 ntBASIC6.2□□□□□ -1.42
USP17L3A6NCW0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.2□□□□□ -1.42
USP17L3A6NCW0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 EXOC5P1-201ENST00000510543 1969 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 TPTE2P4-201ENST00000258589 1605 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RNU6-960P-201ENST00000364056 120 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RNU6-188P-201ENST00000364207 107 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RNA5SP505-201ENST00000364748 108 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RN7SKP153-201ENST00000365026 316 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 EIF4E2P1-201ENST00000393781 255 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 UBE2V1P2-201ENST00000397758 440 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 POLHP1-201ENST00000411806 470 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RPL7P46-201ENST00000425129 740 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC020550.1-201ENST00000447385 163 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC073264.2-201ENST00000448886 166 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 PPIAP3-201ENST00000450588 505 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RPS27AP1-201ENST00000475545 471 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC104806.1-201ENST00000508720 308 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC098591.2-201ENST00000510152 315 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RNA5SP116-201ENST00000516132 98 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RNU6-256P-201ENST00000516747 97 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RNA5SP454-201ENST00000517231 127 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC018630.1-201ENST00000541376 925 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC063950.1-201ENST00000552036 308 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC091042.1-201ENST00000579213 173 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 MIR3667-201ENST00000581025 74 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AC209154.1-201ENST00000582156 337 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 MIR4293-201ENST00000584305 78 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms