Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
TRAV27A0A087WT01 MIR7106-201ENST00000612419 65 ntBASIC2.19□□□□□ -2.06
TRAV27A0A087WT01 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV27A0A087WT01 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV27A0A087WT01 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
TRAV27A0A087WT01 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 RNU6-1027P-201ENST00000383998 107 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 RNU6-1293P-201ENST00000384077 107 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 RNU6-31P-201ENST00000384388 108 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 MIR196B-201ENST00000384852 84 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC073310.1-201ENST00000423226 1033 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AL513175.1-201ENST00000431492 780 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AL392003.1-201ENST00000434394 243 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 TPTE2P6-202ENST00000445572 1007 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 NPM1P13-201ENST00000452663 865 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 RPS24P6-201ENST00000452670 400 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 MTND5P4-201ENST00000514978 288 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC017100.2-201ENST00000584628 355 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 TPMTP1-201ENST00000592307 737 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AP005212.4-201ENST00000614206 710 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AL590410.1-201ENST00000617925 333 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 RNU6-156P-201ENST00000621869 107 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AL365361.1-201ENST00000566942 3481 ntBASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TRAV27A0A087WT01 AC022031.1-201ENST00000585985 2593 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC062016.1-201ENST00000355719 319 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 MIR518C-201ENST00000384822 101 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 FO393413.1-201ENST00000402892 195 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC096664.2-201ENST00000411843 406 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 BX682237.1-201ENST00000415016 335 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 MTCYBP24-201ENST00000420387 1106 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC005517.2-201ENST00000424673 553 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 RPS7P2-201ENST00000435134 607 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 SNRPEP4-201ENST00000435815 279 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 HMGB1P15-201ENST00000453854 435 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AL035407.2-201ENST00000454090 378 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 RPS29P12-201ENST00000460178 152 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC010301.1-201ENST00000473936 355 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 SEM1P1-201ENST00000506694 209 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 OSBPL9P3-201ENST00000534523 595 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC074029.1-201ENST00000552531 1044 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 EIF4BP1-201ENST00000554881 351 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 LARP7P3-201ENST00000579888 337 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 U73479.1-201ENST00000618062 168 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 U4.3-201ENST00000621047 82 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AL049737.1-201ENST00000413920 1403 ntBASIC2.17□□□□□ -2.06
TRAV27A0A087WT01 AC091564.4-201ENST00000533934 2194 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 SNORA80A-201ENST00000363922 136 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 RNU6-629P-201ENST00000384061 103 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC105402.1-201ENST00000413336 545 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC091390.3-201ENST00000426478 338 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 OR6C71P-201ENST00000432580 913 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AL606490.8-201ENST00000441624 319 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AL513328.1-201ENST00000446460 224 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC108938.1-201ENST00000451204 136 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 snoU13.24-201ENST00000458998 104 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 LINC00888-204ENST00000487386 421 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AC096576.1-201ENST00000489014 359 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 AIG1P1-201ENST00000503376 148 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 RPL7L1P13-201ENST00000511702 739 ntBASIC2.16□□□□□ -2.06
TRAV27A0A087WT01 RNA5SP356-201ENST00000515972 94 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms