Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 RNU4-26P-201ENST00000410270 107 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC127526.1-201ENST00000417526 366 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC234779.1-201ENST00000425910 285 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 snoU13.1-201ENST00000459157 104 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 HMGN2P26-201ENST00000463169 339 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC083904.1-201ENST00000487828 231 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC114797.1-201ENST00000514003 728 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-1046P-201ENST00000516538 107 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 ZNF705CP-201ENST00000530515 889 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 DNAJC8P1-201ENST00000554535 372 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC053481.3-201ENST00000577881 843 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AC100830.2-201ENST00000581636 240 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 SNRPGP17-201ENST00000603780 214 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AL355472.4-201ENST00000610233 626 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 CR381572.2-201ENST00000624852 397 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 MTND5P1-201ENST00000445440 1375 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNGAP1Q96PV0 AL359922.3-201ENST00000624779 1670 ntBASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 AC104623.2-202ENST00000623477 4002 ntBASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNGAP1Q96PV0 AP005435.3-201ENST00000531260 3198 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC067945.1-201ENST00000342609 618 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 Y_RNA.231-201ENST00000364358 102 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-639P-201ENST00000384074 107 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-463P-201ENST00000384340 107 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-831P-201ENST00000384548 107 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AL133384.1-201ENST00000412744 351 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 BX510359.2-201ENST00000417920 305 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 OR1AA1P-201ENST00000419597 916 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC137499.1-201ENST00000427602 88 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 ERLEC1P1-201ENST00000433806 578 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 HMGB1P15-201ENST00000453854 435 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AL590639.1-201ENST00000456484 337 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC106872.2-201ENST00000494303 480 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC021146.2-201ENST00000504736 556 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 RNU4-29P-201ENST00000515943 174 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 RN7SL690P-201ENST00000582087 240 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 uc_338.15-201ENST00000615470 191 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 7SK.10-201ENST00000621414 298 ntBASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SYNGAP1Q96PV0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 AL031595.2-201ENST00000624215 19071 ntBASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNGAP1Q96PV0 SNORD42.2-201ENST00000365570 69 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms