Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3□□□□□ -1.93
TPM4P67936 XKRYP6-201ENST00000440468 1116 ntBASIC3□□□□□ -1.93
TPM4P67936 XKRYP3-201ENST00000442113 1116 ntBASIC3□□□□□ -1.93
TPM4P67936 AC004865.1-201ENST00000442276 1003 ntBASIC3□□□□□ -1.93
TPM4P67936 AC112653.1-201ENST00000443851 386 ntBASIC3□□□□□ -1.93
TPM4P67936 MORF4L1P4-201ENST00000450245 976 ntBASIC3□□□□□ -1.93
TPM4P67936 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3□□□□□ -1.93
TPM4P67936 AC008280.2-201ENST00000455473 307 ntBASIC3□□□□□ -1.93
TPM4P67936 AC015908.1-201ENST00000478739 476 ntBASIC3□□□□□ -1.93
TPM4P67936 SNORA74D-201ENST00000516404 141 ntBASIC3□□□□□ -1.93
TPM4P67936 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3□□□□□ -1.93
TPM4P67936 ZDHHC20P3-201ENST00000531576 336 ntBASIC3□□□□□ -1.93
TPM4P67936 HSPE1P20-201ENST00000538133 289 ntBASIC3□□□□□ -1.93
TPM4P67936 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3□□□□□ -1.93
TPM4P67936 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3□□□□□ -1.93
TPM4P67936 MIR4635-201ENST00000583759 79 ntBASIC3□□□□□ -1.93
TPM4P67936 AC245036.5-201ENST00000596330 847 ntBASIC3□□□□□ -1.93
TPM4P67936 DUXAP3-201ENST00000603616 594 ntBASIC3□□□□□ -1.93
TPM4P67936 AL160237.3-201ENST00000604114 1013 ntBASIC3□□□□□ -1.93
TPM4P67936 AC009570.1-201ENST00000609599 745 ntBASIC3□□□□□ -1.93
TPM4P67936 AL360181.4-201ENST00000621752 134 ntBASIC3□□□□□ -1.93
TPM4P67936 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3□□□□□ -1.93
TPM4P67936 AC020763.5-201ENST00000623298 430 ntBASIC3□□□□□ -1.93
TPM4P67936 ABBA01000935.2-201ENST00000637477 838 ntBASIC3□□□□□ -1.93
TPM4P67936 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3□□□□□ -1.93
TPM4P67936 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TPM4P67936 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.99□□□□□ -1.93
TPM4P67936 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TPM4P67936 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
TPM4P67936 SNORA11C-201ENST00000408532 129 ntBASIC2.99□□□□□ -1.93
TPM4P67936 RNA5SP181-201ENST00000410246 98 ntBASIC2.99□□□□□ -1.93
TPM4P67936 RNA5SP492-201ENST00000411330 114 ntBASIC2.99□□□□□ -1.93
TPM4P67936 RPS3AP9-201ENST00000417027 792 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.99□□□□□ -1.93
TPM4P67936 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TPM4P67936 RPS6P14-201ENST00000425165 719 ntBASIC2.99□□□□□ -1.93
TPM4P67936 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 AC005189.1-201ENST00000431286 310 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 CDC27P1-201ENST00000445384 715 ntBASIC2.99□□□□□ -1.93
TPM4P67936 Z96811.1-201ENST00000445880 108 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.99□□□□□ -1.93
TPM4P67936 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
TPM4P67936 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 RNA5SP310-201ENST00000459084 116 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AC126182.1-201ENST00000478134 357 ntBASIC2.99□□□□□ -1.93
TPM4P67936 MTCO3P42-201ENST00000509488 518 ntBASIC2.99□□□□□ -1.93
TPM4P67936 MTCO3P44-201ENST00000510977 541 ntBASIC2.99□□□□□ -1.93
TPM4P67936 SAP18P1-201ENST00000512058 390 ntBASIC2.99□□□□□ -1.93
TPM4P67936 MTCO3P39-201ENST00000514812 518 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 HAUS1P3-201ENST00000523909 662 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.99□□□□□ -1.93
TPM4P67936 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.99□□□□□ -1.93
TPM4P67936 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.99□□□□□ -1.93
TPM4P67936 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.99□□□□□ -1.93
TPM4P67936 AL020997.2-201ENST00000602607 184 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AC128687.1-201ENST00000605304 619 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 AC242628.1-201ENST00000606810 391 ntBASIC2.99□□□□□ -1.93
TPM4P67936 AL355810.1-201ENST00000614629 552 ntBASIC2.99□□□□□ -1.93
TPM4P67936 SNHG22-203ENST00000617833 660 ntBASIC2.99□□□□□ -1.93
TPM4P67936 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.99□□□□□ -1.93
TPM4P67936 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
TPM4P67936 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.99□□□□□ -1.93
TPM4P67936 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.99□□□□□ -1.93
TPM4P67936 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TPM4P67936 SGO1P2-201ENST00000429458 1589 ntBASIC2.99□□□□□ -1.93
TPM4P67936 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TPM4P67936 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.99□□□□□ -1.93
TPM4P67936 AC109315.1-201ENST00000584143 1347 ntBASIC2.98□□□□□ -1.93
TPM4P67936 AC104446.1-201ENST00000613728 1321 ntBASIC2.98□□□□□ -1.93
TPM4P67936 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
TPM4P67936 SNORA51.12-201ENST00000384448 134 ntBASIC2.98□□□□□ -1.93
TPM4P67936 RNA5SP210-201ENST00000391034 120 ntBASIC2.98□□□□□ -1.93
TPM4P67936 SNORA48.5-201ENST00000391143 135 ntBASIC2.98□□□□□ -1.93
TPM4P67936 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TPM4P67936 SSXP10-201ENST00000402595 565 ntBASIC2.98□□□□□ -1.93
TPM4P67936 Z86062.1-201ENST00000406773 777 ntBASIC2.98□□□□□ -1.93
TPM4P67936 HMGN2P30-201ENST00000423237 256 ntBASIC2.98□□□□□ -1.93
TPM4P67936 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.98□□□□□ -1.93
TPM4P67936 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
TPM4P67936 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TPM4P67936 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TPM4P67936 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.98□□□□□ -1.93
TPM4P67936 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.98□□□□□ -1.93
TPM4P67936 MIR5092-201ENST00000583139 88 ntBASIC2.98□□□□□ -1.93
TPM4P67936 BX323046.1-201ENST00000610145 535 ntBASIC2.98□□□□□ -1.93
TPM4P67936 AC104237.2-201ENST00000612456 443 ntBASIC2.98□□□□□ -1.93
TPM4P67936 MIR6076-201ENST00000617521 113 ntBASIC2.98□□□□□ -1.93
TPM4P67936 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.98□□□□□ -1.93
TPM4P67936 AC018926.3-201ENST00000618841 406 ntBASIC2.98□□□□□ -1.93
TPM4P67936 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TPM4P67936 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TPM4P67936 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TPM4P67936 RNU6-1226P-201ENST00000384317 107 ntBASIC2.97□□□□□ -1.93
TPM4P67936 AL138885.1-201ENST00000405921 675 ntBASIC2.97□□□□□ -1.93
TPM4P67936 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms