Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.08□□□□□ -1.92
PKNOX1P55347 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PKNOX1P55347 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.08□□□□□ -1.92
PKNOX1P55347 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.08□□□□□ -1.92
PKNOX1P55347 AC007458.1-201ENST00000542812 373 ntBASIC3.08□□□□□ -1.92
PKNOX1P55347 AC124312.4-201ENST00000605533 310 ntBASIC3.08□□□□□ -1.92
PKNOX1P55347 AC008083.4-201ENST00000615076 444 ntBASIC3.08□□□□□ -1.92
PKNOX1P55347 AC009464.1-201ENST00000615731 469 ntBASIC3.08□□□□□ -1.92
PKNOX1P55347 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.08□□□□□ -1.92
PKNOX1P55347 AL138955.1-201ENST00000622881 1040 ntBASIC3.08□□□□□ -1.92
PKNOX1P55347 AL356863.1-201ENST00000623378 1080 ntBASIC3.08□□□□□ -1.92
PKNOX1P55347 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKNOX1P55347 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
PKNOX1P55347 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PKNOX1P55347 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 OR1S2-201ENST00000302592 978 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 RNU1-33P-201ENST00000364249 162 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 RNU6-657P-201ENST00000383904 107 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 SNORA51.6-201ENST00000384151 125 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 RNU6-1257P-201ENST00000384625 110 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
PKNOX1P55347 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.07□□□□□ -1.92
PKNOX1P55347 HMGN2P31-201ENST00000432430 273 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 GOT2P5-201ENST00000433995 546 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
PKNOX1P55347 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC104308.1-201ENST00000454621 333 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 RPL21P8-201ENST00000465083 535 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 AC010285.1-201ENST00000470580 392 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC006499.5-201ENST00000505037 514 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 AC110794.1-201ENST00000505816 425 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.07□□□□□ -1.92
PKNOX1P55347 MTCO2P32-201ENST00000514865 403 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 SNORA31.20-201ENST00000517111 133 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.07□□□□□ -1.92
PKNOX1P55347 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.07□□□□□ -1.92
PKNOX1P55347 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.07□□□□□ -1.92
PKNOX1P55347 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.07□□□□□ -1.92
PKNOX1P55347 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.07□□□□□ -1.92
PKNOX1P55347 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 XIAPP1-201ENST00000603162 600 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 VIS1.1-201ENST00000610517 203 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 AL592148.2-201ENST00000612210 372 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 MTND2P41-201ENST00000637599 773 ntBASIC3.07□□□□□ -1.92
PKNOX1P55347 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.07□□□□□ -1.92
PKNOX1P55347 AC004925.1-201ENST00000624256 2706 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PKNOX1P55347 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
PKNOX1P55347 SNORD82-201ENST00000365530 70 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PKNOX1P55347 U3.29-201ENST00000391296 212 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 SAR1AP2-201ENST00000392696 594 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 RPS7P15-201ENST00000415804 584 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 AC245052.5-201ENST00000416320 649 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 RPL23AP69-201ENST00000431134 458 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.06□□□□□ -1.92
PKNOX1P55347 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.06□□□□□ -1.92
PKNOX1P55347 AL359073.1-201ENST00000448036 403 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 PDSS1P2-201ENST00000449397 678 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PKNOX1P55347 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.06□□□□□ -1.92
PKNOX1P55347 AC008427.1-201ENST00000503102 655 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.06□□□□□ -1.92
PKNOX1P55347 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
PKNOX1P55347 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.06□□□□□ -1.92
PKNOX1P55347 RNA5SP468-201ENST00000516782 93 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.06□□□□□ -1.92
PKNOX1P55347 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.06□□□□□ -1.92
PKNOX1P55347 AP003102.1-201ENST00000525638 661 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 NDUFS5P6-201ENST00000529136 295 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
PKNOX1P55347 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.06□□□□□ -1.92
PKNOX1P55347 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PKNOX1P55347 RPL21P12-201ENST00000559810 515 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.06□□□□□ -1.92
PKNOX1P55347 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.06□□□□□ -1.92
PKNOX1P55347 AL133393.1-201ENST00000603277 287 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 AC091946.2-201ENST00000606105 291 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 AC019176.2-201ENST00000611579 315 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PKNOX1P55347 AP003476.1-201ENST00000623984 516 ntBASIC3.06□□□□□ -1.92
PKNOX1P55347 AC087821.2-201ENST00000637086 450 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms