Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC104073.1-201ENST00000451988 151 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.13□□□□□ -1.91
CASQ1P31415 AC090525.1-201ENST00000479116 478 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.13□□□□□ -1.91
CASQ1P31415 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CASQ1P31415 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.13□□□□□ -1.91
CASQ1P31415 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.13□□□□□ -1.91
CASQ1P31415 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.13□□□□□ -1.91
CASQ1P31415 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CASQ1P31415 MIR3609-201ENST00000582661 80 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 AC079089.3-201ENST00000603094 673 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 AL136363.1-201ENST00000605349 337 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.13□□□□□ -1.91
CASQ1P31415 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.13□□□□□ -1.91
CASQ1P31415 MIR622-201ENST00000638396 96 ntBASIC3.13□□□□□ -1.91
CASQ1P31415 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CASQ1P31415 AC111188.2-201ENST00000529697 1387 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASQ1P31415 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASQ1P31415 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 SNORA27.3-201ENST00000364937 134 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 AC009961.3-201ENST00000449832 765 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.12□□□□□ -1.91
CASQ1P31415 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.12□□□□□ -1.91
CASQ1P31415 AC091959.2-201ENST00000477363 321 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 RPS27P23-201ENST00000487608 251 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 CDC42P4-201ENST00000510507 563 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.12□□□□□ -1.91
CASQ1P31415 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.12□□□□□ -1.91
CASQ1P31415 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.12□□□□□ -1.91
CASQ1P31415 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.12□□□□□ -1.91
CASQ1P31415 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.12□□□□□ -1.91
CASQ1P31415 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 CKS1BP3-201ENST00000600888 237 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 AL161629.2-201ENST00000615347 275 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 AL355493.4-201ENST00000618530 292 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 SEC63P2-201ENST00000503863 1939 ntBASIC3.12□□□□□ -1.91
CASQ1P31415 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CASQ1P31415 AC008669.1-201ENST00000565823 2178 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CASQ1P31415 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CASQ1P31415 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CASQ1P31415 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CASQ1P31415 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CASQ1P31415 RNA5SP124-201ENST00000362739 110 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 RNA5SP393-201ENST00000363423 117 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CASQ1P31415 RPL7P8-201ENST00000411964 730 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.11□□□□□ -1.91
CASQ1P31415 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.11□□□□□ -1.91
CASQ1P31415 MTCO1P39-201ENST00000426148 480 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.11□□□□□ -1.91
CASQ1P31415 SUMO1P4-201ENST00000429430 302 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AL035246.1-201ENST00000433554 1255 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.11□□□□□ -1.91
CASQ1P31415 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 RN7SL863P-201ENST00000462370 296 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AP000852.1-201ENST00000472460 573 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 AC110794.1-201ENST00000505816 425 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CASQ1P31415 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 AC008716.1-201ENST00000511084 513 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AC092593.2-201ENST00000513866 913 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.11□□□□□ -1.91
CASQ1P31415 HIGD1AP6-201ENST00000521833 279 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.11□□□□□ -1.91
CASQ1P31415 AC103810.1-201ENST00000579873 453 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CASQ1P31415 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 MIR3922-201ENST00000585192 84 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.11□□□□□ -1.91
CASQ1P31415 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 AL035413.2-201ENST00000604801 525 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AC245517.5-201ENST00000611529 162 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AL162274.2-201ENST00000614406 332 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AL355365.1-201ENST00000616480 294 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.11□□□□□ -1.91
CASQ1P31415 AC018692.3-201ENST00000623929 123 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AP003400.6-201ENST00000624698 740 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 MTND5P31-201ENST00000419366 1374 ntBASIC3.11□□□□□ -1.91
CASQ1P31415 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.1□□□□□ -1.91
CASQ1P31415 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CASQ1P31415 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
CASQ1P31415 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.1□□□□□ -1.91
CASQ1P31415 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
CASQ1P31415 MIR649-201ENST00000384843 97 ntBASIC3.1□□□□□ -1.91
CASQ1P31415 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CASQ1P31415 ATP5F1P6-201ENST00000402768 767 ntBASIC3.1□□□□□ -1.91
CASQ1P31415 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CASQ1P31415 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CASQ1P31415 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.1□□□□□ -1.91
CASQ1P31415 RAB9AP3-201ENST00000412737 573 ntBASIC3.1□□□□□ -1.91
CASQ1P31415 AL035410.1-201ENST00000427409 427 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms