Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RN7SL189P-201ENST00000468631 289 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC015911.1-201ENST00000495111 156 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC140172.1-201ENST00000502928 141 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 RNU6-1213P-201ENST00000517075 94 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXD8P13378 AC018442.3-201ENST00000523025 183 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXD8P13378 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXD8P13378 AC063949.1-201ENST00000552900 865 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 MTCO3P23-201ENST00000561363 289 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC074050.1-201ENST00000563247 211 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXD8P13378 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 AC104662.1-201ENST00000604448 511 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 AC010632.3-201ENST00000611377 369 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 MIR6133-201ENST00000617057 108 ntBASIC5.72□□□□□ -1.49
HOXD8P13378 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HOXD8P13378 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HOXD8P13378 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXD8P13378 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXD8P13378 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HOXD8P13378 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
HOXD8P13378 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD8P13378 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-1287P-201ENST00000362914 107 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 SNORD82-201ENST00000365530 70 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-1040P-201ENST00000383974 107 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-1032P-201ENST00000384100 107 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-1226P-201ENST00000384317 107 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-310P-201ENST00000384655 107 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-1060P-201ENST00000384664 107 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 UBE2V1P2-201ENST00000397758 440 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AL133482.1-201ENST00000415988 498 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AL590139.1-201ENST00000416267 400 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD8P13378 AL590609.2-201ENST00000421430 368 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXD8P13378 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD8P13378 FTLP19-201ENST00000433300 394 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-1218P-201ENST00000458990 108 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 snoU13.20-201ENST00000459180 104 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 RN7SL244P-201ENST00000493405 297 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AL139099.1-201ENST00000497398 403 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 AC026801.2-201ENST00000515352 425 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AC093853.1-201ENST00000515689 483 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 RNU6-798P-201ENST00000516912 103 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 AC090136.1-201ENST00000520009 240 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXD8P13378 AP000857.1-201ENST00000532151 543 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD8P13378 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD8P13378 MYL12BP1-201ENST00000569826 507 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 MIR6839-201ENST00000620425 113 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 AL162373.1-201ENST00000620433 407 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 AL669831.3-213ENST00000636676 183 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 IRF5P1-201ENST00000504852 2164 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD8P13378 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD8P13378 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.71□□□□□ -1.5
HOXD8P13378 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD8P13378 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD8P13378 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
HOXD8P13378 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD8P13378 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 NLRP3P1-201ENST00000622303 1785 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXD8P13378 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD8P13378 RNU6-954P-201ENST00000411355 107 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 VDAC1P9-201ENST00000412766 841 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AL591848.1-201ENST00000413092 322 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD8P13378 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms