Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3B1O00203 AC093519.1-201ENST00000566109 298 ntBASIC3.25□□□□□ -1.89
AP3B1O00203 AC079791.1-201ENST00000605356 973 ntBASIC3.25□□□□□ -1.89
AP3B1O00203 U1.23-201ENST00000610293 146 ntBASIC3.25□□□□□ -1.89
AP3B1O00203 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
AP3B1O00203 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
AP3B1O00203 AL353748.2-201ENST00000622148 471 ntBASIC3.25□□□□□ -1.89
AP3B1O00203 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
AP3B1O00203 AL512506.2-201ENST00000624472 458 ntBASIC3.25□□□□□ -1.89
AP3B1O00203 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3B1O00203 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3B1O00203 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
AP3B1O00203 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3B1O00203 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3B1O00203 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
AP3B1O00203 SNORA62.3-201ENST00000365110 153 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3B1O00203 RNU6-481P-201ENST00000384194 107 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 SNORD51-201ENST00000384320 80 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 MIR493-201ENST00000385254 89 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AL136372.1-201ENST00000403060 228 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 RN7SKP123-201ENST00000410732 291 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 HSFY4P-201ENST00000415994 1181 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP3B1O00203 AC012497.1-201ENST00000429392 575 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 EZH2P1-201ENST00000431167 291 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AC091286.1-201ENST00000431233 461 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AC005345.1-201ENST00000431868 217 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AC234064.1-201ENST00000436312 247 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3B1O00203 SETP6-201ENST00000479329 568 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 RNU6-1102P-201ENST00000516149 96 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 RNA5SP135-201ENST00000517019 125 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3B1O00203 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3B1O00203 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP3B1O00203 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3B1O00203 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3B1O00203 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3B1O00203 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3B1O00203 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3B1O00203 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3B1O00203 NCAPGP2-201ENST00000557911 754 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 SULT1C2P1-202ENST00000562418 459 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3B1O00203 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3B1O00203 AP002906.1-201ENST00000603405 233 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AP002826.1-201ENST00000608835 315 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AC007275.1-201ENST00000621243 671 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 AP006248.3-201ENST00000623580 594 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3B1O00203 BX649567.1-201ENST00000642071 1134 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
AP3B1O00203 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.24□□□□□ -1.89
AP3B1O00203 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3B1O00203 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP3B1O00203 ZNF849P-201ENST00000594711 1566 ntBASIC3.24□□□□□ -1.89
AP3B1O00203 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3B1O00203 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP3B1O00203 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP3B1O00203 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP3B1O00203 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP3B1O00203 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
AP3B1O00203 SNORA51.6-201ENST00000384151 125 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AC025750.1-201ENST00000399891 379 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3B1O00203 RPL27AP8-201ENST00000424277 446 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.23□□□□□ -1.89
AP3B1O00203 AC104332.2-201ENST00000429959 156 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AC091862.1-201ENST00000438016 1100 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 RPL23AP58-201ENST00000440453 469 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 HMGB3P6-201ENST00000444896 598 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AL050341.1-201ENST00000447743 313 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP3B1O00203 CYCSP35-201ENST00000451978 304 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
AP3B1O00203 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.23□□□□□ -1.89
AP3B1O00203 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP3B1O00203 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.23□□□□□ -1.89
AP3B1O00203 RNU6-362P-201ENST00000516736 90 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.23□□□□□ -1.89
AP3B1O00203 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3B1O00203 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.23□□□□□ -1.89
AP3B1O00203 GLUD1P4-201ENST00000590914 418 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.23□□□□□ -1.89
AP3B1O00203 AC078899.3-201ENST00000599065 212 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 CKS1BP3-201ENST00000600888 237 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AL671309.1-201ENST00000603750 544 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AL162713.1-201ENST00000604480 262 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 NUTF2P8-201ENST00000604593 363 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AC008083.4-201ENST00000615076 444 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.23□□□□□ -1.89
AP3B1O00203 AC091925.2-201ENST00000625059 256 ntBASIC3.23□□□□□ -1.89
AP3B1O00203 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
AP3B1O00203 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP3B1O00203 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
AP3B1O00203 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms