Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC063976.3-201ENST00000426849 329 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 NANOGNBP1-201ENST00000448444 480 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 RSL24D1P3-201ENST00000449255 495 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 RPS23P3-201ENST00000470993 430 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 RN7SL274P-201ENST00000492268 272 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 MTND3P24-201ENST00000506306 329 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AC034159.1-201ENST00000513885 583 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AC008083.4-201ENST00000615076 444 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AC007342.8-201ENST00000623278 678 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 KPNA2P1-201ENST00000458289 1591 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 MIR627-201ENST00000384979 97 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 MIR34B-201ENST00000385076 84 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AL513331.1-201ENST00000411908 397 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AL592148.1-201ENST00000413568 445 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 NANOGP5-201ENST00000424456 877 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 OR6C71P-201ENST00000432580 913 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 UBE2FP3-201ENST00000436366 524 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 OR7L1P-201ENST00000456181 380 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 RPS27P21-201ENST00000486977 252 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC234781.5-201ENST00000508429 271 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC074250.1-201ENST00000511117 192 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 SNORA31.1-201ENST00000515993 133 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 RNU1-61P-201ENST00000516107 151 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 SNORA31.5-201ENST00000516190 133 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 RNU4-60P-201ENST00000517239 135 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 MTCYBP20-201ENST00000524239 1129 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC079600.2-201ENST00000550076 130 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 LRRC37A5P-203ENST00000580181 585 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 RPS15AP11-201ENST00000594193 385 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC007621.1-201ENST00000604544 437 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AL137843.1-201ENST00000605078 385 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC245517.5-201ENST00000611529 162 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC008432.1-201ENST00000615912 1320 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 AC022079.2-201ENST00000619739 566 ntBASIC1.53□□□□□ -2.16
LINC01549A6NIU2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01549A6NIU2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
LINC01549A6NIU2 MTND5P3-201ENST00000438536 1800 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 Z99496.1-201ENST00000469424 1477 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 MIR518C-201ENST00000384822 101 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 MIR524-201ENST00000385242 87 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC107081.1-201ENST00000414975 361 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 ARL5AP4-201ENST00000430731 512 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 SNORD109B-201ENST00000458961 67 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 SNORD109A-201ENST00000459128 67 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 FABP5P6-201ENST00000510588 409 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 MIR514B-201ENST00000516774 80 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC009127.3-201ENST00000570531 403 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01549A6NIU2 CU459211.1-201ENST00000635667 749 ntBASIC1.52□□□□□ -2.17
LINC01549A6NIU2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 RNA5SP160-201ENST00000364866 120 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AL355497.1-201ENST00000406262 551 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 HMGB1P11-201ENST00000413899 637 ntBASIC1.51□□□□□ -2.17
LINC01549A6NIU2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01549A6NIU2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms