Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.364-201ENST00000365532 101 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.463-201ENST00000384271 102 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RNU6-821P-201ENST00000390995 107 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RNU2-47P-201ENST00000410649 186 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC114482.1-201ENST00000418010 247 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 NUP35P1-201ENST00000422734 947 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RPS26P47-201ENST00000427219 348 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 GAPDHP59-201ENST00000435908 267 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC234775.1-201ENST00000454247 670 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RNU7-167P-201ENST00000459160 62 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC008481.1-201ENST00000463278 396 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC058823.1-201ENST00000485315 474 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RBBP4P6-201ENST00000508098 202 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC005798.1-201ENST00000513715 387 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RNU6-1069P-201ENST00000516612 133 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RN7SKP277-201ENST00000516895 283 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.708-201ENST00000516950 96 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 RNU6-1213P-201ENST00000517075 94 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AP006245.2-201ENST00000522004 300 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 OR10G5P-201ENST00000532733 358 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AL161670.1-201ENST00000554348 137 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 OR1F2P-201ENST00000570470 933 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 MIR4502-201ENST00000580432 81 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AL031176.1-201ENST00000604554 466 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC011373.1-201ENST00000607270 237 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC005014.2-201ENST00000607795 599 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC244107.2-201ENST00000611773 76 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 DUSP12P1-201ENST00000612874 516 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 TUG1_2.1-201ENST00000614234 87 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AL450345.1-202ENST00000605741 3881 ntBASIC4.78□□□□□ -1.64
SHISA3A0PJX4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHISA3A0PJX4 AC000374.1-201ENST00000434698 1745 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MTND5P30-201ENST00000452896 1731 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 SNORA64.1-201ENST00000362600 132 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 RNU6-702P-201ENST00000364982 107 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 RNA5SP279-201ENST00000365513 117 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 SMIM11P1-201ENST00000369586 178 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 RNU6-890P-201ENST00000384121 107 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 SNORD70.1-201ENST00000391007 85 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 SNORA75.6-201ENST00000391318 127 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AL583834.1-201ENST00000406943 343 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 RPL30P3-201ENST00000424262 333 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AL160004.2-201ENST00000432935 350 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MTCO3P45-201ENST00000443036 613 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AL162389.1-201ENST00000449233 177 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC007967.1-201ENST00000455422 1159 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 RPS17P15-201ENST00000475609 349 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms