Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hmg20bQ9Z104 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Hmg20bQ9Z104 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hmg20bQ9Z104 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hmg20bQ9Z104 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20bQ9Z104 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Gm5587-201ENSMUST00000206270 674 ntBASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20bQ9Z104 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Mir770-201ENSMUST00000103252 94 ntBASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Mir7071-201ENSMUST00000184847 69 ntBASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hmg20bQ9Z104 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20bQ9Z104 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Gm44430-201ENSMUST00000203376 995 ntBASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20bQ9Z104 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms