Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn8aQ9WTU3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn8aQ9WTU3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scn8aQ9WTU3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Gm13884-201ENSMUST00000118103 829 ntBASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn8aQ9WTU3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Mzt1-203ENSMUST00000227948 952 ntBASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Gm28659-201ENSMUST00000188013 759 ntBASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn8aQ9WTU3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Gm8097-201ENSMUST00000117903 829 ntBASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn8aQ9WTU3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn8aQ9WTU3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms