Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm26399-201ENSMUST00000103937 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Mir449b-201ENSMUST00000104833 80 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm25349-201ENSMUST00000177728 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm23616-201ENSMUST00000177797 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm25871-201ENSMUST00000177816 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm24752-201ENSMUST00000178240 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm24496-201ENSMUST00000178287 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm25649-201ENSMUST00000178476 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm25548-201ENSMUST00000178681 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm23147-201ENSMUST00000178841 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm26095-201ENSMUST00000179270 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm22171-201ENSMUST00000179283 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm23936-201ENSMUST00000179354 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm22619-201ENSMUST00000179516 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm25255-201ENSMUST00000179579 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm24755-201ENSMUST00000179691 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm26506-201ENSMUST00000179692 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm25086-201ENSMUST00000179931 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm23243-201ENSMUST00000180047 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm24659-201ENSMUST00000180212 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm24169-201ENSMUST00000180244 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm23689-201ENSMUST00000180354 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm27359-201ENSMUST00000184153 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm27785-201ENSMUST00000184268 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm27466-201ENSMUST00000184396 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm27703-201ENSMUST00000184836 110 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm18889-201ENSMUST00000174284 929 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm22175-201ENSMUST00000175007 78 ntBASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col4a4Q9QZR9 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.33■□□□□ 0.21
Col4a4Q9QZR9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.33■□□□□ 0.21
Col4a4Q9QZR9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.33■□□□□ 0.21
Col4a4Q9QZR9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col4a4Q9QZR9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Mir6977-201ENSMUST00000184960 64 ntBASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Gm7774-201ENSMUST00000200064 533 ntBASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col4a4Q9QZR9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Gm27301-201ENSMUST00000184012 127 ntBASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.32■□□□□ 0.2
Col4a4Q9QZR9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a4Q9QZR9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col4a4Q9QZR9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a4Q9QZR9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a4Q9QZR9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a4Q9QZR9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms