Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Il3ra-202ENSMUST00000223589 738 ntBASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh5Q9QUM7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Msh5Q9QUM7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Gm11539-201ENSMUST00000119837 557 ntBASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Gm13436-201ENSMUST00000120418 567 ntBASIC16.74■□□□□ 0.27
Msh5Q9QUM7 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Msh5Q9QUM7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh5Q9QUM7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms