Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Gm13216-201ENSMUST00000117145 591 ntBASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Gm2274-201ENSMUST00000184539 609 ntBASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Gm18959-201ENSMUST00000208954 655 ntBASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Gm7370-201ENSMUST00000219471 767 ntBASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a2Q9JLR1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a2Q9JLR1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a2Q9JLR1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Mir5130-201ENSMUST00000175160 84 ntBASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Gm45058-201ENSMUST00000205810 766 ntBASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms