Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem3Q9JKE1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem3Q9JKE1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trem3Q9JKE1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trem3Q9JKE1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms