Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Gm27389-201ENSMUST00000183622 195 ntBASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.27■□□□□ 0.2
Tubb3Q9ERD7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Tubb3Q9ERD7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Gm6345-202ENSMUST00000180900 204 ntBASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tubb3Q9ERD7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Mir1668-201ENSMUST00000184114 107 ntBASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Gm7213-201ENSMUST00000215977 950 ntBASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tubb3Q9ERD7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms