Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-4Q9EQM3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Gm27646-201ENSMUST00000183989 110 ntBASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-4Q9EQM3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Gm11764-201ENSMUST00000120221 623 ntBASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-4Q9EQM3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Gm13616-201ENSMUST00000120600 222 ntBASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-4Q9EQM3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 AA543401-201ENSMUST00000164248 1269 ntBASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-4Q9EQM3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms