Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.77■□□□□ 0.6
Col4a3bpQ9EQG9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col4a3bpQ9EQG9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col4a3bpQ9EQG9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col4a3bpQ9EQG9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col4a3bpQ9EQG9 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a3bpQ9EQG9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a3bpQ9EQG9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Gm23634-201ENSMUST00000175071 91 ntBASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Gm44450-201ENSMUST00000199528 114 ntBASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col4a3bpQ9EQG9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col4a3bpQ9EQG9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms