Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ap3s1Q9DCR2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ap3s1Q9DCR2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ap3s1Q9DCR2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ap3s1Q9DCR2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Gm7514-201ENSMUST00000209475 934 ntBASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ap3s1Q9DCR2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Gm44549-201ENSMUST00000208351 577 ntBASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ap3s1Q9DCR2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ap3s1Q9DCR2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.61□□□□□ -0.07
Ap3s1Q9DCR2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms