Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Gm26039-201ENSMUST00000158152 144 ntBASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.16■□□□□ 0.66
Ccdc7Q9D541 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc7Q9D541 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc7Q9D541 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc7Q9D541 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc7Q9D541 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc7Q9D541 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc7Q9D541 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc7Q9D541 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc7Q9D541 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc7Q9D541 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc7Q9D541 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc7Q9D541 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc7Q9D541 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Gm7889-201ENSMUST00000185591 958 ntBASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Gm45058-201ENSMUST00000205810 766 ntBASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.12■□□□□ 0.65
Ccdc7Q9D541 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc7Q9D541 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms