Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.45■□□□□ 0.7
Stag1Q9D3E6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stag1Q9D3E6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Gm7506-201ENSMUST00000207758 815 ntBASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stag1Q9D3E6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Gm36967-201ENSMUST00000193814 266 ntBASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stag1Q9D3E6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Mir5131-201ENSMUST00000175426 93 ntBASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Gm10060-201ENSMUST00000212002 111 ntBASIC19.42■□□□□ 0.7
Stag1Q9D3E6 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Stag1Q9D3E6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Gm18206-201ENSMUST00000207027 926 ntBASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms