Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.53■□□□□ 0.08
Upk1aQ9D132 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.53■□□□□ 0.08
Upk1aQ9D132 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.53■□□□□ 0.08
Upk1aQ9D132 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.53■□□□□ 0.08
Upk1aQ9D132 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk1aQ9D132 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.52■□□□□ 0.08
Upk1aQ9D132 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk1aQ9D132 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.52■□□□□ 0.07
Upk1aQ9D132 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk1aQ9D132 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Gm12085-201ENSMUST00000119263 940 ntBASIC15.51■□□□□ 0.07
Upk1aQ9D132 Gm10653-202ENSMUST00000139570 835 ntBASIC15.51■□□□□ 0.07
Upk1aQ9D132 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.51■□□□□ 0.07
Upk1aQ9D132 Actl10-202ENSMUST00000226583 1501 ntBASIC15.51■□□□□ 0.07
Upk1aQ9D132 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Upk1aQ9D132 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk1aQ9D132 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.5■□□□□ 0.07
Upk1aQ9D132 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Gm29257-201ENSMUST00000186115 639 ntBASIC15.5■□□□□ 0.07
Upk1aQ9D132 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.5■□□□□ 0.07
Upk1aQ9D132 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Upk1aQ9D132 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms