Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chaf1bQ9D0N7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Chaf1bQ9D0N7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chaf1bQ9D0N7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chaf1bQ9D0N7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Gm27275-201ENSMUST00000184318 272 ntBASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chaf1bQ9D0N7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Gm12933-201ENSMUST00000120203 872 ntBASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Gm8495-201ENSMUST00000188740 694 ntBASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Chaf1bQ9D0N7 Sybu-209ENSMUST00000228639 4113 ntBASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Gm37179-201ENSMUST00000194862 823 ntBASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms