Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.66■□□□□ 0.1
Shmt2Q9CZN7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shmt2Q9CZN7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Shmt2Q9CZN7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Shmt2Q9CZN7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.64■□□□□ 0.09
Shmt2Q9CZN7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.63■□□□□ 0.09
Shmt2Q9CZN7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shmt2Q9CZN7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shmt2Q9CZN7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shmt2Q9CZN7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.62■□□□□ 0.09
Shmt2Q9CZN7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms