Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssr1Q9CY50 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ssr1Q9CY50 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssr1Q9CY50 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Gm7791-201ENSMUST00000219066 539 ntBASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Gm10812-201ENSMUST00000099864 546 ntBASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ssr1Q9CY50 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Prob1-201ENSMUST00000097619 3021 ntBASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Gm715-201ENSMUST00000117865 831 ntBASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssr1Q9CY50 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Gm22240-201ENSMUST00000175225 82 ntBASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Il3ra-202ENSMUST00000223589 738 ntBASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.73■□□□□ 0.43
Ssr1Q9CY50 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms