Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Gm11025-201ENSMUST00000140773 466 ntBASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldnd1Q9CQX5 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Gm17271-201ENSMUST00000165535 355 ntBASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldnd1Q9CQX5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldnd1Q9CQX5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Gm11764-201ENSMUST00000120221 623 ntBASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cldnd1Q9CQX5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Gm44872-201ENSMUST00000207864 420 ntBASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cldnd1Q9CQX5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms