Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm7Q9CQQ8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Lsm7Q9CQQ8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm7Q9CQQ8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Lsm7Q9CQQ8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm7Q9CQQ8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm7Q9CQQ8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm7Q9CQQ8 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Birc2-201ENSMUST00000054878 378 ntBASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm7Q9CQQ8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Gm43347-201ENSMUST00000200226 580 ntBASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm7Q9CQQ8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gm34391-201ENSMUST00000203706 907 ntBASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm7Q9CQQ8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms