Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTRAFQ9CQE8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTRAFQ9CQE8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Gm2399-201ENSMUST00000104944 225 ntBASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTRAFQ9CQE8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 Gm7514-201ENSMUST00000209475 934 ntBASIC13.35□□□□□ -0.27
RTRAFQ9CQE8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms