Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Gm12933-201ENSMUST00000120203 872 ntBASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.82□□□□□ -0.04
Krt88Q9CPR6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Gm12896-201ENSMUST00000118430 226 ntBASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Krt88Q9CPR6 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.8□□□□□ -0.04
Krt88Q9CPR6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Gm27000-201ENSMUST00000182943 842 ntBASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Gm37292-201ENSMUST00000192062 758 ntBASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt88Q9CPR6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt88Q9CPR6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms